Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.SAGA complex.SPT recruitment module.component HAF/TAF1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr8 1 CH_acertr_545 2 2 0.00070497
Aquilegia oxysepala CHR03 1 CH_aox_212 2 2 0.000240597
Citrus clementina scaffold_9 1 CH_ccl_280 2 2 0.0000820311
Ceratophyllum demersum 6 1 CH_cde_76 2 2 0.0000789796
Cardamine hirsuta Chr3 1 CH_chi_396 2 3 0.000622048
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_564 2 2 0.000119596
Sequoiadendron giganteum chr5 1 CH_sgi_243 4 5 0.00000000000173422
Trochodendron aralioides group12 1 CH_tar_468 2 3 0.000540303
Vanilla planifolia CM028157.1 1 CH_vpl_143 2 2 0.000073888
Acer truncatum chr8 2 CH_acertr_545 2 2 0.00070497
Aquilegia oxysepala CHR03 2 CH_aox_212 2 2 0.000240597
Citrus clementina scaffold_9 2 CH_ccl_280 2 2 0.0000820311
Ceratophyllum demersum 6 2 CH_cde_76 2 2 0.0000789796
Cardamine hirsuta Chr3 2 CH_chi_396 2 3 0.000622048
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_564 2 2 0.000119596
Sequoiadendron giganteum chr5 2 CH_sgi_243 4 5 0.00000000000173422
Trochodendron aralioides group12 2 CH_tar_468 2 3 0.000540303
Vanilla planifolia CM028157.1 2 CH_vpl_143 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001