Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.SAGA complex.SPT recruitment module.component SPT20/ADA5

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr11 1 CH_acertr_401 2 2 0.000211491
Actinidia chinensis Lachesis_group27 1 CH_ach_114 2 2 0.000162964
Brassica carinata ChrC03 1 CH_bca_1124 2 3 0.000961902
Brassica carinata ChrB03 1 CH_bca_1125 2 3 0.000961902
Ceratophyllum demersum 5 1 CH_cde_146 2 2 0.000236939
Carica papaya supercontig_25 1 CH_cpa_160 2 2 0.0000950661
Glycine max Gm16 1 CH_gma_483 2 3 0.000341591
Pisum sativum chr5LG3 1 CH_psa_426 2 3 0.000938886
Sequoiadendron giganteum chr4 1 CH_sgi_213 4 4 0.000000000000346852
Sapria himalayana scaffold51_3900769 1 CH_shi_20 3 3 0.00000000490454
Trochodendron aralioides group3 1 CH_tar_324 2 2 0.00018011
Acer truncatum chr11 2 CH_acertr_401 2 2 0.000211491
Actinidia chinensis Lachesis_group27 2 CH_ach_114 2 2 0.000162964
Brassica carinata ChrC03 2 CH_bca_1124 2 3 0.000961902
Brassica carinata ChrB03 2 CH_bca_1125 2 3 0.000961902
Ceratophyllum demersum 5 2 CH_cde_146 2 2 0.000236939
Carica papaya supercontig_25 2 CH_cpa_160 2 2 0.0000950661
Glycine max Gm16 2 CH_gma_483 2 3 0.000341591
Pisum sativum chr5LG3 2 CH_psa_426 2 3 0.000938886
Sequoiadendron giganteum chr4 2 CH_sgi_213 4 4 0.000000000000346852
Sapria himalayana scaffold51_3900769 2 CH_shi_20 3 3 0.00000000490454
Trochodendron aralioides group3 2 CH_tar_324 2 2 0.00018011

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001