Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TFIId complex.component TAF2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr15 1 CH_camsi_799 2 5 0.000458516
Corylus avellana 7 1 CH_cav_33 4 5 0.00000000000676071
Carica papaya supercontig_13 1 CH_cpa_262 2 3 0.000285185
Gossypium hirsutum D07 1 CH_ghi_192 3 3 0.0000000106947
Hydrangea macrophylla Hma1.2p1_0595F.1 1 CH_hma_177 2 2 0.000111086
Lonicera japonica GWHAAZE00000009 1 CH_lonja_172 3 3 0.000000021519
Sequoiadendron giganteum chr2 1 CH_sgi_798 2 2 0.0000487151
Trochodendron aralioides group13 1 CH_tar_253 2 2 0.0000600366
Camellia sinensis var. sinensis Chr15 2 CH_camsi_799 2 5 0.000458516
Corylus avellana 7 2 CH_cav_33 4 5 0.00000000000676071
Carica papaya supercontig_13 2 CH_cpa_262 2 3 0.000285185
Gossypium hirsutum D07 2 CH_ghi_192 3 3 0.0000000106947
Gossypium hirsutum A07 2 CH_ghi_612 2 2 0.000267016
Hydrangea macrophylla Hma1.2p1_0595F.1 2 CH_hma_177 2 2 0.000111086
Lonicera japonica GWHAAZE00000009 2 CH_lonja_172 3 3 0.000000021519
Sequoiadendron giganteum chr2 2 CH_sgi_798 2 2 0.0000487151
Trochodendron aralioides group13 2 CH_tar_253 2 2 0.0000600366

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001