Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TFIId complex.TATA-box-binding component
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amborella trichopoda | AmTr_v1.0_scaffold00047 | 1 | CH_atr_290 | 2 | 2 | 0.000476644 |
Eutrema salsugineum | scaffold_13 | 1 | CH_esa_237 | 2 | 2 | 0.00022845 |
Fragaria vesca | Fvb3 | 1 | CH_fve_232 | 3 | 9 | 0.0000152941 |
Lactuca sativa | Lsat_1_v8_lg_6 | 1 | CH_lsa_490 | 2 | 2 | 0.000514007 |
Magnolia biondii | Chr11 | 1 | CH_mbi_325 | 2 | 2 | 0.0000485661 |
Theobroma cacao | Chromosome_1 | 1 | CH_tca_177 | 3 | 4 | 0.000000321816 |
Tarenaya hassleriana | NW_010961290.1 | 1 | CH_tha_26 | 4 | 7 | 0.000000000536601 |
Amborella trichopoda | AmTr_v1.0_scaffold00047 | 2 | CH_atr_290 | 2 | 2 | 0.000476644 |
Eutrema salsugineum | scaffold_13 | 2 | CH_esa_237 | 2 | 2 | 0.00022845 |
Fragaria vesca | Fvb3 | 2 | CH_fve_232 | 3 | 9 | 0.0000152941 |
Lactuca sativa | Lsat_1_v8_lg_6 | 2 | CH_lsa_490 | 2 | 2 | 0.000514007 |
Magnolia biondii | Chr11 | 2 | CH_mbi_325 | 2 | 2 | 0.0000485661 |
Theobroma cacao | Chromosome_1 | 2 | CH_tca_177 | 3 | 4 | 0.000000321816 |
Tarenaya hassleriana | NW_010961290.1 | 2 | CH_tha_26 | 4 | 7 | 0.000000000536601 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |