Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TAF module shared with SAGA/TFIId complexes.component TAF6

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Corylus avellana 5 1 CH_cav_444 2 3 0.000689981
Gossypium hirsutum D05 1 CH_ghi_268 3 5 0.000000213876
Gossypium raimondii Chr09 1 CH_gra_389 2 3 0.000482475
Lupinus albus Lalb_Chr20 1 CH_lal_170 3 25 0.0000379734
Medicago truncatula chr7 1 CH_mtr_603 2 2 0.000123259
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_344 4 47 0.00000118316
Sequoiadendron giganteum chr4 1 CH_sgi_1082 2 2 0.000146145
Vitis vinifera chr12 1 CH_vvi_190 3 5 0.000000867705
Corylus avellana 5 2 CH_cav_444 2 3 0.000689981
Gossypium hirsutum D05 2 CH_ghi_268 3 5 0.000000213876
Gossypium raimondii Chr09 2 CH_gra_389 2 3 0.000482475
Lupinus albus Lalb_Chr20 2 CH_lal_170 3 25 0.0000379734
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_344 4 47 0.00000118316
Sequoiadendron giganteum chr4 2 CH_sgi_1082 2 2 0.000146145
Vitis vinifera chr12 2 CH_vvi_190 3 5 0.000000867705

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001