Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TATA box-binding protein (TBP) regulation.NC2 regulator heterodimer.component beta
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brassica carinata | ChrC03 | 1 | CH_bca_776 | 2 | 2 | 0.000213764 |
Helianthus annuus | HanXRQChr09 | 1 | CH_han_560 | 2 | 2 | 0.000231857 |
Striga asiatica | scaffold33 | 1 | CH_sas_58 | 2 | 2 | 0.0000625371 |
Sequoiadendron giganteum | chr1 | 1 | CH_sgi_1055 | 2 | 2 | 0.000146145 |
Brassica carinata | ChrC03 | 2 | CH_bca_776 | 2 | 2 | 0.000213764 |
Helianthus annuus | HanXRQChr09 | 2 | CH_han_560 | 2 | 2 | 0.000231857 |
Striga asiatica | scaffold33 | 2 | CH_sas_58 | 2 | 2 | 0.0000625371 |
Sequoiadendron giganteum | chr1 | 2 | CH_sgi_1055 | 2 | 2 | 0.000146145 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |