Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TATA box-binding protein (TBP) regulation.NC2 regulator heterodimer.component beta

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC03 1 CH_bca_776 2 2 0.000213764
Helianthus annuus HanXRQChr09 1 CH_han_560 2 2 0.000231857
Striga asiatica scaffold33 1 CH_sas_58 2 2 0.0000625371
Sequoiadendron giganteum chr1 1 CH_sgi_1055 2 2 0.000146145
Brassica carinata ChrC03 2 CH_bca_776 2 2 0.000213764
Helianthus annuus HanXRQChr09 2 CH_han_560 2 2 0.000231857
Striga asiatica scaffold33 2 CH_sas_58 2 2 0.0000625371
Sequoiadendron giganteum chr1 2 CH_sgi_1055 2 2 0.000146145

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001