Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIa basal transcription factor heterodimer.large subunit

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-1 1 CH_aar_102 3 7 0.00000436798
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 1 CH_arhy_629 2 2 0.000449075
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 1 CH_arhy_630 2 2 0.000449075
Amborella trichopoda AmTr_v1.0_scaffold00012 1 CH_atr_288 2 2 0.000476644
Amborella trichopoda AmTr_v1.0_scaffold00009 1 CH_atr_289 2 2 0.000476644
Camellia sinensis var. sinensis Chr11 1 CH_camsi_215 3 3 0.0000000126162
Chara braunii BFEA01000168 1 CH_cbr_86 2 3 0.000215773
Eutrema salsugineum scaffold_5 1 CH_esa_301 2 3 0.000685305
Lactuca sativa Lsat_1_v8_lg_8 1 CH_lsa_447 2 2 0.000308404
Magnolia biondii Chr17 1 CH_mbi_445 2 2 0.000145698
Petunia axillaris Peaxi162Scf00481 1 CH_pax_230 2 3 0.00021106
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_327 3 9 0.000000800825
Trochodendron aralioides group16 1 CH_tar_424 2 2 0.00036022
Aethionema arabicum LG-1 2 CH_aar_102 3 7 0.00000436798
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 2 CH_arhy_629 2 2 0.000449075
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 2 CH_arhy_630 2 2 0.000449075
Amborella trichopoda AmTr_v1.0_scaffold00012 2 CH_atr_288 2 2 0.000476644
Amborella trichopoda AmTr_v1.0_scaffold00009 2 CH_atr_289 2 2 0.000476644
Camellia sinensis var. sinensis Chr11 2 CH_camsi_215 3 3 0.0000000126162
Chara braunii BFEA01000168 2 CH_cbr_86 2 3 0.000215773
Eutrema salsugineum scaffold_5 2 CH_esa_301 2 3 0.000685305
Lactuca sativa Lsat_1_v8_lg_8 2 CH_lsa_447 2 2 0.000308404
Magnolia biondii Chr17 2 CH_mbi_445 2 2 0.000145698
Petunia axillaris Peaxi162Scf00481 2 CH_pax_230 2 3 0.00021106
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_327 3 9 0.000000800825
Trochodendron aralioides group16 2 CH_tar_424 2 2 0.00036022

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001