Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.RNA polymerase-II phosphorylation/dephosphorylation.group-I phosphatase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr10 1 CH_acertr_428 2 2 0.000211491
Actinidia chinensis Lachesis_group0 1 CH_ach_241 2 2 0.000543213
Carya illinoinensis Chr09 1 CH_cil_490 2 2 0.000371897
Gossypium raimondii Chr10 1 CH_gra_360 2 2 0.000321664
Tarenaya hassleriana NW_010965775.1 1 CH_tha_183 2 2 0.000419082
Vanilla planifolia CM028152.1 1 CH_vpl_28 4 12 0.00000000299388
Vitis vinifera chrUn 1 CH_vvi_348 2 2 0.000228189
Acer truncatum chr10 2 CH_acertr_428 2 2 0.000211491
Actinidia chinensis Lachesis_group0 2 CH_ach_241 2 2 0.000543213
Carya illinoinensis Chr09 2 CH_cil_490 2 2 0.000371897
Gossypium hirsutum A06 2 CH_ghi_786 2 2 0.000560733
Gossypium raimondii Chr10 2 CH_gra_360 2 2 0.000321664
Tarenaya hassleriana NW_010965775.1 2 CH_tha_183 2 2 0.000419082
Vanilla planifolia CM028152.1 2 CH_vpl_28 4 12 0.00000000299388
Vitis vinifera chrUn 2 CH_vvi_348 2 2 0.000228189

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001