Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase I-dependent transcription.transcription termination factor (TTF1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-9 1 CH_aar_126 3 30 0.0000506292
Acer truncatum chr3 1 CH_acertr_103 3 4 0.000000029819
Capsicum annuum PGAv.1.6.scaffold861 1 CH_can_326 2 3 0.000247821
Daucus carota DCARv2_Chr7 1 CH_dca_379 2 2 0.000382665
Erythranthe guttata scaffold_4 1 CH_egut_318 2 2 0.0000728147
Nicotiana tabacum Nitab4.5_0000712 1 CH_nta_50 3 4 0.000000722346
Petunia axillaris Peaxi162Scf00102 1 CH_pax_100 3 4 0.000000296979
Papaver somniferum NC_039359.1 1 CH_pso_227 3 3 0.0000000639203
Rosa chinensis RcHm_v2.0_Chr7 1 CH_rch_678 2 2 0.000239192
Sequoiadendron giganteum chr7 1 CH_sgi_421 3 3 0.00000000355983
Solanum tuberosum ST4.03ch03 1 CH_stu_549 2 3 0.000461188
Aethionema arabicum LG-9 2 CH_aar_126 3 30 0.0000506292
Acer truncatum chr3 2 CH_acertr_103 3 4 0.000000029819
Capsicum annuum PGAv.1.6.scaffold861 2 CH_can_326 2 3 0.000247821
Daucus carota DCARv2_Chr7 2 CH_dca_379 2 2 0.000382665
Erythranthe guttata scaffold_4 2 CH_egut_318 2 2 0.0000728147
Nicotiana tabacum Nitab4.5_0000712 2 CH_nta_50 3 4 0.000000722346
Petunia axillaris Peaxi162Scf00102 2 CH_pax_100 3 4 0.000000296979
Papaver somniferum NC_039359.1 2 CH_pso_227 3 3 0.0000000639203
Rosa chinensis RcHm_v2.0_Chr7 2 CH_rch_678 2 2 0.000239192
Sequoiadendron giganteum chr7 2 CH_sgi_421 3 3 0.00000000355983
Solanum tuberosum ST4.03ch03 2 CH_stu_549 2 3 0.000461188

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001