Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase I-dependent transcription.TFIf basal transcription factor heterodimer.large subunit

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR02 1 CH_aox_291 2 2 0.000481193
Beta vulgaris Chr7_EL10_PGA_scaffold5 1 CH_bvu_217 2 3 0.000248365
Camellia sinensis var. sinensis Chr15 1 CH_camsi_546 2 2 0.0000458547
Cicer arietinum L. Ca_LG1_v3 1 CH_car_215 2 3 0.000233481
Pisum sativum chr6LG2 1 CH_psa_289 2 2 0.00015649
Sequoiadendron giganteum chr7 1 CH_sgi_894 2 2 0.0000487151
Trifolium pratense Tp57577_TGAC_v2_LG2 1 CH_tpr_245 2 2 0.0000756974
Aquilegia oxysepala CHR02 2 CH_aox_291 2 2 0.000481193
Beta vulgaris Chr7_EL10_PGA_scaffold5 2 CH_bvu_217 2 3 0.000248365
Camellia sinensis var. sinensis Chr15 2 CH_camsi_546 2 2 0.0000458547
Cicer arietinum L. Ca_LG1_v3 2 CH_car_215 2 3 0.000233481
Lotus japonicus chr6 2 CH_lja_275 2 2 0.0000715077
Pisum sativum chr6LG2 2 CH_psa_289 2 2 0.00015649
Sequoiadendron giganteum chr7 2 CH_sgi_894 2 2 0.0000487151
Trifolium pratense Tp57577_TGAC_v2_LG2 2 CH_tpr_245 2 2 0.0000756974

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001