Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase I-dependent transcription.transcription initiation factor (CCG/MEE12)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_362 1 CH_aag_165 2 2 0.000481541
Acer truncatum chr11 1 CH_acertr_354 2 2 0.000070497
Aquilegia oxysepala CHR05 1 CH_aox_65 3 3 0.0000000385927
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 1 CH_arhy_595 2 2 0.000299383
Cardamine hirsuta Chr5 1 CH_chi_318 2 2 0.000207361
Petunia axillaris Peaxi162Scf00342 1 CH_pax_268 2 2 0.000211067
Quercus lobata 3 1 CH_qlo_347 4 31 0.0000000129825
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_676 2 2 0.000239192
Rosa chinensis RcHm_v2.0_Chr7 1 CH_rch_677 2 2 0.000239192
Anthoceros agrestis Sc2ySwM_362 2 CH_aag_165 2 2 0.000481541
Acer truncatum chr11 2 CH_acertr_354 2 2 0.000070497
Aquilegia oxysepala CHR05 2 CH_aox_65 3 3 0.0000000385927
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 2 CH_arhy_595 2 2 0.000299383
Cardamine hirsuta Chr5 2 CH_chi_318 2 2 0.000207361
Eucalyptus grandis Chr02 2 CH_egr_705 2 2 0.0000585274
Petunia axillaris Peaxi162Scf00342 2 CH_pax_268 2 2 0.000211067
Quercus lobata 3 2 CH_qlo_347 4 31 0.0000000129825
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_676 2 2 0.000239192
Rosa chinensis RcHm_v2.0_Chr7 2 CH_rch_677 2 2 0.000239192

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001