Functional clusters

Information

  • Type MapMan
  • Description DNA damage response.nucleotide excision repair (NER).transcription-coupled nucleotide excision repair (TC-NER).deubiquitinase (UBP12-13)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr1 1 CH_camsi_159 4 7 0.000000000708507
Corylus avellana 6 1 CH_cav_421 2 2 0.000460017
Pisum sativum chr2LG1 1 CH_psa_405 2 2 0.000782452
Papaver somniferum NC_039364.1 1 CH_pso_373 3 6 0.0000147409
Papaver somniferum NC_039367.1 1 CH_pso_44 7 27 4.58927e-16
Sequoiadendron giganteum chr3 1 CH_sgi_502 3 4 0.0000000569549
Utricularia gibba unitig_749 1 CH_ugi_219 2 2 0.000220378
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_373 2 2 0.000557543
Vigna mungo CM024075.1 1 CH_vmu_425 2 2 0.000969211
Camellia sinensis var. sinensis Chr1 2 CH_camsi_159 4 7 0.000000000708507
Corylus avellana 6 2 CH_cav_421 2 2 0.000460017
Pisum sativum chr2LG1 2 CH_psa_405 2 2 0.000782452
Papaver somniferum NC_039364.1 2 CH_pso_373 3 6 0.0000147409
Papaver somniferum NC_039367.1 2 CH_pso_44 7 27 4.58927e-16
Sequoiadendron giganteum chr3 2 CH_sgi_502 3 4 0.0000000569549
Utricularia gibba unitig_749 2 CH_ugi_219 2 2 0.000220378
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_373 2 2 0.000557543
Vigna mungo CM024075.1 2 CH_vmu_425 2 2 0.000969211

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001