Functional clusters
Information
- Type MapMan
- Description DNA damage response.base excision repair (BER).DNA phosphatase (ZDP)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Camellia sinensis var. sinensis | Chr7 | 1 | CH_camsi_631 | 2 | 3 | 0.000137561 |
Citrullus lanatus | CG_Chr07 | 1 | CH_cla_177 | 2 | 2 | 0.000266134 |
Erigeron canadensis | Conyza_canadensis_scaffold:5 | 1 | CH_eca_287 | 2 | 2 | 0.0000448722 |
Pisum sativum | chr3LG5 | 1 | CH_psa_37 | 4 | 6 | 0.00000000000638739 |
Papaver somniferum | NC_039361.1 | 1 | CH_pso_546 | 2 | 2 | 0.000225233 |
Papaver somniferum | NC_039365.1 | 1 | CH_pso_547 | 2 | 2 | 0.000225233 |
Quercus lobata | 8 | 1 | CH_qlo_773 | 2 | 3 | 0.000154883 |
Rosa chinensis | RcHm_v2.0_Chr5 | 1 | CH_rch_496 | 2 | 2 | 0.0000398653 |
Sequoiadendron giganteum | chr5 | 1 | CH_sgi_955 | 2 | 2 | 0.0000487151 |
Camellia sinensis var. sinensis | Chr7 | 2 | CH_camsi_631 | 2 | 3 | 0.000137561 |
Citrullus lanatus | CG_Chr07 | 2 | CH_cla_177 | 2 | 2 | 0.000266134 |
Erigeron canadensis | Conyza_canadensis_scaffold:5 | 2 | CH_eca_287 | 2 | 2 | 0.0000448722 |
Pisum sativum | chr3LG5 | 2 | CH_psa_37 | 4 | 6 | 0.00000000000638739 |
Papaver somniferum | NC_039361.1 | 2 | CH_pso_546 | 2 | 2 | 0.000225233 |
Papaver somniferum | NC_039365.1 | 2 | CH_pso_547 | 2 | 2 | 0.000225233 |
Quercus lobata | 8 | 2 | CH_qlo_773 | 2 | 3 | 0.000154883 |
Rosa chinensis | RcHm_v2.0_Chr5 | 2 | CH_rch_496 | 2 | 2 | 0.0000398653 |
Sequoiadendron giganteum | chr5 | 2 | CH_sgi_955 | 2 | 2 | 0.0000487151 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |