Functional clusters

Information

  • Type MapMan
  • Description DNA damage response.base excision repair (BER).bifunctional glycosylase-lyase and endonuclease (NTH)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 1 CH_acertr_397 2 3 0.000211484
Aquilegia oxysepala CHR07 1 CH_aox_183 2 2 0.0000801989
Brassica carinata ChrC07 1 CH_bca_722 2 2 0.000128259
Citrus clementina scaffold_3 1 CH_ccl_334 2 2 0.0000820311
Daucus carota DCARv2_Chr8 1 CH_dca_413 2 5 0.000637714
Erigeron canadensis Conyza_canadensis_scaffold:3 1 CH_eca_286 2 2 0.0000448722
Marchantia polymorpha scaffold_58 1 CH_mpo_33 3 5 0.000000182952
Papaver somniferum NW_020620714.1 1 CH_pso_440 2 2 0.0000675699
Selenicereus undatus Scaffold_19641 1 CH_sun_148 2 2 0.0000726639
Acer truncatum chr3 2 CH_acertr_397 2 3 0.000211484
Aquilegia oxysepala CHR07 2 CH_aox_183 2 2 0.0000801989
Brassica carinata ChrC07 2 CH_bca_722 2 2 0.000128259
Citrus clementina scaffold_3 2 CH_ccl_334 2 2 0.0000820311
Daucus carota DCARv2_Chr8 2 CH_dca_413 2 5 0.000637714
Erigeron canadensis Conyza_canadensis_scaffold:3 2 CH_eca_286 2 2 0.0000448722
Marchantia polymorpha scaffold_58 2 CH_mpo_33 3 5 0.000000182952
Papaver somniferum NW_020620714.1 2 CH_pso_440 2 2 0.0000675699
Selenicereus undatus Scaffold_19641 2 CH_sun_148 2 2 0.0000726639

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001