Functional clusters

Information

  • Type MapMan
  • Description DNA damage response.homologous recombination repair (HR).Smc5-Smc6 complex.NSE1-NSE3-NSE4 subcomplex.ubiquitin ligase component NSE1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC03 1 CH_bca_785 2 2 0.000213764
Brassica napus BNapus_Darmor_BZH_scaffold_38 1 CH_bna_506 2 2 0.000111309
Brassica oleracea C2 1 CH_bol_268 2 2 0.0000980584
Brassica rapa A02 1 CH_bra_228 2 2 0.000128794
Beta vulgaris Chr7_EL10_PGA_scaffold5 1 CH_bvu_17 6 14 0.00000000000000183943
Camellia sinensis var. sinensis Chr11 1 CH_camsi_531 2 2 0.0000458547
Daucus carota DCARv2_Chr7 1 CH_dca_227 2 2 0.0000637775
Brassica carinata ChrC03 2 CH_bca_785 2 2 0.000213764
Brassica oleracea C2 2 CH_bol_268 2 2 0.0000980584
Brassica rapa A02 2 CH_bra_228 2 2 0.000128794
Beta vulgaris Chr7_EL10_PGA_scaffold5 2 CH_bvu_17 6 14 0.00000000000000183943
Camellia sinensis var. sinensis Chr11 2 CH_camsi_531 2 2 0.0000458547
Daucus carota DCARv2_Chr7 2 CH_dca_227 2 2 0.0000637775

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001