Functional clusters

Information

  • Type MapMan
  • Description DNA damage response.DNA repair polymerase activities.DNA polymerase lambda (POLL)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica napus C08 1 CH_bna_527 2 3 0.000166961
Coffea canephora chr11 1 CH_ccan_178 2 8 0.0000255533
Carica papaya supercontig_5 1 CH_cpa_61 3 5 0.000000135557
Chenopodium quinoa C_Quinoa_Scaffold_4244 1 CH_cqu_478 2 3 0.000426422
Fragaria x ananassa Fvb4-3 1 CH_fan_440 2 2 0.000185036
Fragaria vesca Fvb4 1 CH_fve_416 2 2 0.000353461
Malus domestica Chr16 1 CH_mdo_386 2 2 0.0000379212
Quercus lobata 3 1 CH_qlo_1009 2 6 0.000774353
Rosa chinensis RcHm_v2.0_Chr4 1 CH_rch_613 2 2 0.000119596
Sapria himalayana scaffold7_18583372 1 CH_shi_171 2 3 0.000171536
Tripterygium wilfordii NC_052237.1 1 CH_twi_185 2 2 0.0000557507
Vigna mungo CM024077.1 1 CH_vmu_382 2 5 0.000646078
Vanilla planifolia CM028157.1 1 CH_vpl_19 4 6 0.0000000000181531
Coffea canephora chr11 2 CH_ccan_178 2 8 0.0000255533
Carica papaya supercontig_5 2 CH_cpa_61 3 5 0.000000135557
Chenopodium quinoa C_Quinoa_Scaffold_4244 2 CH_cqu_478 2 3 0.000426422
Fragaria x ananassa Fvb4-3 2 CH_fan_440 2 2 0.000185036
Fragaria vesca Fvb4 2 CH_fve_416 2 2 0.000353461
Malus domestica Chr16 2 CH_mdo_386 2 2 0.0000379212
Quercus lobata 3 2 CH_qlo_1009 2 6 0.000774353
Rosa chinensis RcHm_v2.0_Chr4 2 CH_rch_613 2 2 0.000119596
Sapria himalayana scaffold7_18583372 2 CH_shi_171 2 3 0.000171536
Tripterygium wilfordii NC_052237.1 2 CH_twi_185 2 2 0.0000557507
Vigna mungo CM024077.1 2 CH_vmu_382 2 5 0.000646078
Vanilla planifolia CM028157.1 2 CH_vpl_19 4 6 0.0000000000181531

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001