Functional clusters

Information

  • Type MapMan
  • Description DNA damage response.DNA damage sensing and signalling.DNA damage checkpoint activation.ATR-ATRIP DNA damage sensor complex.kinase co-activator component ATRIP

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr0 1 CH_ccan_309 2 15 0.000387551
Citrus clementina scaffold_5 1 CH_ccl_115 3 3 0.0000000100941
Ceratophyllum demersum 1 1 CH_cde_90 2 2 0.0000789796
Magnolia biondii Chr04 1 CH_mbi_324 2 2 0.0000485661
Sequoiadendron giganteum chr2 1 CH_sgi_796 2 2 0.0000487151
Sapria himalayana scaffold22_8815566 1 CH_shi_147 2 3 0.000171536
Solanum tuberosum ST4.03ch08 1 CH_stu_372 2 2 0.0000512453
Coffea canephora chr0 2 CH_ccan_309 2 15 0.000387551
Citrus clementina scaffold_5 2 CH_ccl_115 3 3 0.0000000100941
Ceratophyllum demersum 1 2 CH_cde_90 2 2 0.0000789796
Magnolia biondii Chr04 2 CH_mbi_324 2 2 0.0000485661
Sequoiadendron giganteum chr2 2 CH_sgi_796 2 2 0.0000487151
Sapria himalayana scaffold22_8815566 2 CH_shi_147 2 3 0.000171536
Solanum tuberosum ST4.03ch08 2 CH_stu_372 2 2 0.0000512453

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001