Functional clusters
Information
- Type MapMan
- Description Cell cycle organisation.organellar DNA replication.DNA recombination
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Coffea canephora | chr10 | 1 | CH_ccan_103 | 3 | 24 | 0.0000011012 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2230 | 1 | CH_cqu_149 | 4 | 12 | 0.00000011278 |
| Magnolia biondii | Chr06 | 1 | CH_mbi_231 | 3 | 7 | 0.00000247588 |
| Coffea canephora | chr10 | 2 | CH_ccan_103 | 3 | 24 | 0.0000011012 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2230 | 2 | CH_cqu_149 | 4 | 12 | 0.00000011278 |
| Magnolia biondii | Chr06 | 2 | CH_mbi_231 | 3 | 7 | 0.00000247588 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| 13.5.7.1 | Cell cycle organisation.organellar DNA replication.DNA recombination.recombination mediator (Whirly) | 4 |
| 13.5.7.2 | Cell cycle organisation.organellar DNA replication.DNA recombination.recombination mediator (RAD52) | 4 |
| 13.5.7.3 | Cell cycle organisation.organellar DNA replication.DNA recombination.Holliday junction resolvase (MOC1) | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |