Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.cytokinesis.cell-plate formation.SNARE cell-plate vesicle fusion complex.R-SNARE component VAMP721/VAMP722

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_4 1 CH_aly_445 2 2 0.000990066
Arabidopsis lyrata scaffold_1 1 CH_aly_446 2 2 0.000990066
Arabidopsis thaliana Chr2 1 CH_ath_370 2 2 0.000429738
Cardamine hirsuta Chr1 1 CH_chi_351 2 2 0.000414723
Capsella rubella scaffold_1 1 CH_cru_410 2 2 0.000731154
Eucalyptus grandis Chr07 1 CH_egr_234 5 10 0.0000000000102385
Eutrema salsugineum scaffold_5 1 CH_esa_319 2 2 0.000761499
Pisum sativum chr3LG5 1 CH_psa_397 2 2 0.000782452
Rosa chinensis RcHm_v2.0_Chr6 1 CH_rch_723 2 2 0.000398653
Schrenkiella parvula ch1-1 1 CH_spa_286 2 2 0.00078734
Arabidopsis lyrata scaffold_4 2 CH_aly_445 2 2 0.000990066
Arabidopsis lyrata scaffold_1 2 CH_aly_446 2 2 0.000990066
Arabidopsis thaliana Chr2 2 CH_ath_370 2 2 0.000429738
Cardamine hirsuta Chr1 2 CH_chi_351 2 2 0.000414723
Capsella rubella scaffold_1 2 CH_cru_410 2 2 0.000731154
Eucalyptus grandis Chr07 2 CH_egr_234 5 10 0.0000000000102385
Eutrema salsugineum scaffold_5 2 CH_esa_319 2 2 0.000761499
Pisum sativum chr3LG5 2 CH_psa_397 2 2 0.000782452
Rosa chinensis RcHm_v2.0_Chr6 2 CH_rch_723 2 2 0.000398653
Schrenkiella parvula ch1-1 2 CH_spa_286 2 2 0.00078734

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001