Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.component MUS81

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00053 1 CH_atr_155 2 2 0.0000794407
Camellia sinensis var. sinensis Chr3 1 CH_camsi_110 4 8 0.0000000000202471
Carpinus fangiana Cfa04 1 CH_cfa_211 2 2 0.0000757346
Lonicera japonica GWHAAZE00000009 1 CH_lonja_151 3 3 0.00000000537991
Magnolia biondii Chr17 1 CH_mbi_392 2 3 0.000145695
Petunia axillaris Peaxi162Scf00309 1 CH_pax_58 3 3 0.00000000742514
Simmondsia chinensis GWHAASQ00000010 1 CH_sci_134 2 2 0.0000851426
Sapria himalayana scaffold6_19132642 1 CH_shi_46 3 8 0.000000274615
Solanum lycopersicum SL4.0ch01 1 CH_sly_296 2 2 0.0000586941
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_79 3 3 0.0000000129529
Zea mays 3 1 CH_zma_178 2 3 0.00015339
Amborella trichopoda AmTr_v1.0_scaffold00053 2 CH_atr_155 2 2 0.0000794407
Camellia sinensis var. sinensis Chr3 2 CH_camsi_110 4 8 0.0000000000202471
Carpinus fangiana Cfa04 2 CH_cfa_211 2 2 0.0000757346
Lonicera japonica GWHAAZE00000009 2 CH_lonja_151 3 3 0.00000000537991
Magnolia biondii Chr17 2 CH_mbi_392 2 3 0.000145695
Petunia axillaris Peaxi162Scf00309 2 CH_pax_58 3 3 0.00000000742514
Simmondsia chinensis GWHAASQ00000010 2 CH_sci_134 2 2 0.0000851426
Sapria himalayana scaffold6_19132642 2 CH_shi_46 3 8 0.000000274615
Solanum lycopersicum SL4.0ch01 2 CH_sly_296 2 2 0.0000586941
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_79 3 3 0.0000000129529
Zea mays 3 2 CH_zma_178 2 3 0.00015339

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001