Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic double strand break initiation.accessory protein (PRD2/MEI4)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr2 1 CH_camsi_698 2 4 0.000275116
Helianthus annuus HanXRQChr16 1 CH_han_478 2 3 0.000115926
Hydrangea macrophylla Hma1.2p1_0222F.1 1 CH_hma_319 2 3 0.000333241
Petunia axillaris Peaxi162Scf00401 1 CH_pax_187 2 2 0.0000703556
Populus trichocarpa Chr06 1 CH_ptr_300 2 2 0.0000578001
Sapria himalayana scaffold5_19632047 1 CH_shi_81 2 2 0.0000571804
Solanum lycopersicum SL4.0ch07 1 CH_sly_313 2 2 0.0000586941
Camellia sinensis var. sinensis Chr2 2 CH_camsi_698 2 4 0.000275116
Helianthus annuus HanXRQChr16 2 CH_han_478 2 3 0.000115926
Hydrangea macrophylla Hma1.2p1_0222F.1 2 CH_hma_319 2 3 0.000333241
Petunia axillaris Peaxi162Scf00401 2 CH_pax_187 2 2 0.0000703556
Populus trichocarpa Chr06 2 CH_ptr_300 2 2 0.0000578001
Sapria himalayana scaffold5_19632047 2 CH_shi_81 2 2 0.0000571804
Solanum lycopersicum SL4.0ch07 2 CH_sly_313 2 2 0.0000586941

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001