Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.mitosis and meiosis.sister chromatid separation.cohesin dissociation.separase (ESP1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 1 CH_acertr_238 3 19 0.0000288671
Amaranthus hybridus AmaHy_arrow1_Scaffold_7 1 CH_amhyb_127 2 2 0.0000841751
Amborella trichopoda AmTr_v1.0_scaffold00001 1 CH_atr_234 2 3 0.000238313
Brassica carinata ChrC02 1 CH_bca_847 2 2 0.000320646
Brassica napus C04 1 CH_bna_41 5 11 0.00000000000032494
Cardamine hirsuta Chr7 1 CH_chi_412 2 2 0.000691204
Cardamine hirsuta Chr8 1 CH_chi_413 2 2 0.000691204
Carica papaya supercontig_148 1 CH_cpa_186 2 2 0.0000950661
Lonicera japonica GWHAAZE00000009 1 CH_lonja_356 2 2 0.0000598874
Malus domestica Chr08 1 CH_mdo_111 4 7 0.000000000200375
Malus domestica Chr15 1 CH_mdo_734 2 2 0.000796344
Rosa chinensis RcHm_v2.0_Chr4 1 CH_rch_757 2 2 0.000597979
Sequoiadendron giganteum chr2 1 CH_sgi_1360 2 2 0.000730727
Sequoiadendron giganteum chr2 1 CH_sgi_512 3 3 0.0000000711967
Utricularia gibba unitig_26 1 CH_ugi_137 2 2 0.0000734592
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_36 5 8 0.000000000000187897
Acer truncatum chr6 2 CH_acertr_238 3 19 0.0000288671
Amaranthus hybridus AmaHy_arrow1_Scaffold_7 2 CH_amhyb_127 2 2 0.0000841751
Amborella trichopoda AmTr_v1.0_scaffold00001 2 CH_atr_234 2 3 0.000238313
Brassica carinata ChrC02 2 CH_bca_847 2 2 0.000320646
Cardamine hirsuta Chr7 2 CH_chi_412 2 2 0.000691204
Cardamine hirsuta Chr8 2 CH_chi_413 2 2 0.000691204
Carica papaya supercontig_148 2 CH_cpa_186 2 2 0.0000950661
Lonicera japonica GWHAAZE00000009 2 CH_lonja_356 2 2 0.0000598874
Malus domestica Chr08 2 CH_mdo_111 4 7 0.000000000200375
Malus domestica Chr15 2 CH_mdo_734 2 2 0.000796344
Rosa chinensis RcHm_v2.0_Chr4 2 CH_rch_757 2 2 0.000597979
Sequoiadendron giganteum chr2 2 CH_sgi_1360 2 2 0.000730727
Sequoiadendron giganteum chr2 2 CH_sgi_512 3 3 0.0000000711967
Utricularia gibba unitig_26 2 CH_ugi_137 2 2 0.0000734592
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_36 5 8 0.000000000000187897

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001