Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.mitosis and meiosis.sister chromatid separation.cohesin loading.SCC2-SCC4 adherin complex.adherin (SCC4)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr10 1 CH_acertr_81 3 3 0.000000007455
Coffea canephora chr1 1 CH_ccan_123 2 4 0.00000425891
Citrus clementina scaffold_5 1 CH_ccl_279 2 2 0.0000820311
Citrullus lanatus CG_Chr10 1 CH_cla_103 2 2 0.0000887115
Carica papaya supercontig_2 1 CH_cpa_158 2 2 0.0000950661
Nelumbo nucifera chr5 1 CH_nnu_272 2 2 0.0000436015
Sequoiadendron giganteum chr4 1 CH_sgi_1007 2 3 0.000146142
Tarenaya hassleriana NW_010966882.1 1 CH_tha_132 2 2 0.000209541
Acer truncatum chr10 2 CH_acertr_81 3 3 0.000000007455
Coffea canephora chr1 2 CH_ccan_123 2 4 0.00000425891
Citrus clementina scaffold_5 2 CH_ccl_279 2 2 0.0000820311
Citrullus lanatus CG_Chr10 2 CH_cla_103 2 2 0.0000887115
Carica papaya supercontig_2 2 CH_cpa_158 2 2 0.0000950661
Nelumbo nucifera chr5 2 CH_nnu_272 2 2 0.0000436015
Sequoiadendron giganteum chr4 2 CH_sgi_1007 2 3 0.000146142
Tarenaya hassleriana NW_010966882.1 2 CH_tha_132 2 2 0.000209541

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001