Functional clusters

Information

  • Type MapMan
  • Description Cell cycle organisation.mitosis and meiosis.chromosome segregation.centromere assembly and maintenance.chromosome passenger complex (CPC).component INCENP/WYRD

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group10 1 CH_ach_288 2 3 0.000977721
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 1 CH_arhy_548 2 3 0.000269438
Amborella trichopoda AmTr_v1.0_scaffold00055 1 CH_atr_87 3 3 0.0000000946662
Brassica carinata ChrB08 1 CH_bca_144 3 3 0.00000000274174
Brassica napus C02 1 CH_bna_504 2 2 0.000111309
Ceratophyllum demersum 1 1 CH_cde_22 3 3 0.0000000374281
Helianthus annuus HanXRQChr03 1 CH_han_491 2 2 0.000115929
Lonicera japonica GWHAAZE00000001 1 CH_lonja_343 2 2 0.0000598874
Lactuca sativa Lsat_1_v8_lg_9 1 CH_lsa_234 3 14 0.00000144218
Pisum sativum chr2LG1 1 CH_psa_270 2 2 0.00015649
Sequoiadendron giganteum chr3 1 CH_sgi_1357 2 2 0.000730727
Sequoiadendron giganteum chr8 1 CH_sgi_318 4 7 0.000000000182063
Sapria himalayana scaffold60_3140063 1 CH_shi_137 2 3 0.000171536
Trifolium pratense Tp57577_TGAC_v2_LG1 1 CH_tpr_207 2 2 0.0000756974
Tripterygium wilfordii NC_052250.1 1 CH_twi_78 3 3 0.0000000186494
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_306 2 2 0.000278772
Actinidia chinensis Lachesis_group10 2 CH_ach_288 2 3 0.000977721
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 2 CH_arhy_548 2 3 0.000269438
Amborella trichopoda AmTr_v1.0_scaffold00055 2 CH_atr_87 3 3 0.0000000946662
Brassica carinata ChrB08 2 CH_bca_144 3 3 0.00000000274174
Ceratophyllum demersum 1 2 CH_cde_22 3 3 0.0000000374281
Helianthus annuus HanXRQChr03 2 CH_han_491 2 2 0.000115929
Lonicera japonica GWHAAZE00000001 2 CH_lonja_343 2 2 0.0000598874
Lactuca sativa Lsat_1_v8_lg_9 2 CH_lsa_234 3 14 0.00000144218
Pisum sativum chr2LG1 2 CH_psa_270 2 2 0.00015649
Sequoiadendron giganteum chr3 2 CH_sgi_1357 2 2 0.000730727
Sequoiadendron giganteum chr8 2 CH_sgi_318 4 7 0.000000000182063
Sapria himalayana scaffold60_3140063 2 CH_shi_137 2 3 0.000171536
Trifolium pratense Tp57577_TGAC_v2_LG1 2 CH_tpr_207 2 2 0.0000756974
Tripterygium wilfordii NC_052250.1 2 CH_twi_78 3 3 0.0000000186494
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_306 2 2 0.000278772

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001