Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.DNA methylation.RNA-independent DNA methylation.ASI1-AIPP1-EDM2 chromatin silencing regulator complex.component ASI1/IBM2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Beta vulgaris Chr5_EL10_PGA_scaffold2 1 CH_bvu_264 2 2 0.00049675
Corylus avellana 3 1 CH_cav_442 2 3 0.000689981
Cardamine hirsuta Chr6 1 CH_chi_291 2 2 0.000207361
Lupinus albus Lalb_Chr08 1 CH_lal_350 2 2 0.000524824
Pisum sativum chr6LG2 1 CH_psa_420 2 4 0.000938861
Simmondsia chinensis GWHAASQ00000023 1 CH_sci_147 2 2 0.0000851426
Sequoiadendron giganteum chr4 1 CH_sgi_1078 2 2 0.000146145
Trifolium pratense Tp57577_TGAC_v2_LG1 1 CH_tpr_357 2 2 0.000454184
Beta vulgaris Chr5_EL10_PGA_scaffold2 2 CH_bvu_264 2 2 0.00049675
Corylus avellana 3 2 CH_cav_442 2 3 0.000689981
Cardamine hirsuta Chr6 2 CH_chi_291 2 2 0.000207361
Lupinus albus Lalb_Chr08 2 CH_lal_350 2 2 0.000524824
Pisum sativum chr6LG2 2 CH_psa_420 2 4 0.000938861
Simmondsia chinensis GWHAASQ00000023 2 CH_sci_147 2 2 0.0000851426
Sequoiadendron giganteum chr4 2 CH_sgi_1078 2 2 0.000146145
Trifolium pratense Tp57577_TGAC_v2_LG1 2 CH_tpr_357 2 2 0.000454184

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001