Functional clusters
Information
- Type MapMan
- Description Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.endoribonuclease (DCL3)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Capsella rubella | scaffold_5 | 1 | CH_cru_408 | 2 | 5 | 0.000731074 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 1 | CH_eca_275 | 2 | 2 | 0.0000448722 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 1 | CH_lsa_486 | 2 | 5 | 0.000513967 |
| Capsella rubella | scaffold_5 | 2 | CH_cru_408 | 2 | 5 | 0.000731074 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 2 | CH_eca_275 | 2 | 2 | 0.0000448722 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 2 | CH_lsa_486 | 2 | 5 | 0.000513967 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |