Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.auxiliary factor (MORC)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_7 1 CH_aly_130 3 3 0.000000228728
Arabidopsis thaliana Chr4 1 CH_ath_115 3 3 0.0000000430914
Capsicum annuum PGAv.1.6.scaffold674 1 CH_can_175 3 3 0.00000122846
Chenopodium quinoa C_Quinoa_Scaffold_1703 1 CH_cqu_216 3 3 0.00000122584
Chenopodium quinoa C_Quinoa_Scaffold_3422 1 CH_cqu_217 3 3 0.00000122584
Erigeron canadensis Conyza_canadensis_scaffold:7 1 CH_eca_77 4 7 0.0000000019916
Hydrangea macrophylla Hma1.2p1_0592F.1 1 CH_hma_82 3 4 0.00000888235
Sequoiadendron giganteum chr6 1 CH_sgi_135 7 17 7.01554e-17
Sequoiadendron giganteum chr9 1 CH_sgi_677 3 5 0.000012952
Sapria himalayana scaffold19_10581841 1 CH_shi_204 2 2 0.000343083
Arabidopsis lyrata scaffold_7 2 CH_aly_130 3 3 0.000000228728
Arabidopsis thaliana Chr4 2 CH_ath_115 3 3 0.0000000430914
Capsicum annuum PGAv.1.6.scaffold674 2 CH_can_175 3 3 0.00000122846
Chenopodium quinoa C_Quinoa_Scaffold_1703 2 CH_cqu_216 3 3 0.00000122584
Chenopodium quinoa C_Quinoa_Scaffold_3422 2 CH_cqu_217 3 3 0.00000122584
Erigeron canadensis Conyza_canadensis_scaffold:7 2 CH_eca_77 4 7 0.0000000019916
Eucalyptus grandis Chr02 2 CH_egr_902 2 2 0.000585274
Hydrangea macrophylla Hma1.2p1_0592F.1 2 CH_hma_82 3 4 0.00000888235
Sequoiadendron giganteum chr6 2 CH_sgi_135 7 17 7.01554e-17
Sequoiadendron giganteum chr9 2 CH_sgi_677 3 5 0.000012952
Sapria himalayana scaffold19_10581841 2 CH_shi_204 2 2 0.000343083

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001