Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.methyl-DNA-binding factor (SUVH2/9)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_13 1 CH_amhyb_203 2 2 0.000252525
Coffea canephora chr3 1 CH_ccan_326 2 16 0.000511054
Trifolium pratense Tp57577_TGAC_v2_LG4 1 CH_tpr_242 2 2 0.0000756974
Amaranthus hybridus AmaHy_arrow1_Scaffold_13 2 CH_amhyb_203 2 2 0.000252525
Coffea canephora chr3 2 CH_ccan_326 2 16 0.000511054
Trifolium pratense Tp57577_TGAC_v2_LG4 2 CH_tpr_242 2 2 0.0000756974

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001