Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.Rad5/16-like group.chromatin remodeling factor (Rad5)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00101 1 CH_atr_287 2 2 0.000476644
Chenopodium quinoa C_Quinoa_Scaffold_3970 1 CH_cqu_537 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_4077 1 CH_cqu_538 2 2 0.000710732
Daucus carota DCARv2_Chr6 1 CH_dca_418 2 2 0.000637775
Malus domestica Chr00 1 CH_mdo_635 2 2 0.000379212
Physcomitrium patens Chr05 1 CH_ppa_215 2 2 0.000367636
Prunus persica Pp07 1 CH_ppe_452 2 2 0.000447577
Populus trichocarpa Chr16 1 CH_ptr_80 4 4 0.00000000000869034
Salix brachista GWHAAZH00000016 1 CH_sbr_105 3 3 0.000000119127
Trochodendron aralioides group7 1 CH_tar_421 2 2 0.00036022
Amborella trichopoda AmTr_v1.0_scaffold00101 2 CH_atr_287 2 2 0.000476644
Chenopodium quinoa C_Quinoa_Scaffold_3970 2 CH_cqu_537 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_4077 2 CH_cqu_538 2 2 0.000710732
Daucus carota DCARv2_Chr6 2 CH_dca_418 2 2 0.000637775
Malus domestica Chr00 2 CH_mdo_635 2 2 0.000379212
Physcomitrium patens Chr05 2 CH_ppa_215 2 2 0.000367636
Prunus persica Pp07 2 CH_ppe_452 2 2 0.000447577
Populus trichocarpa Chr16 2 CH_ptr_80 4 4 0.00000000000869034
Salix brachista GWHAAZH00000016 2 CH_sbr_105 3 3 0.000000119127
Trochodendron aralioides group7 2 CH_tar_421 2 2 0.00036022

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001