Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.SSO1653-like group.chromatin remodeling factor (SHPRH)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 1 CH_arhy_570 2 2 0.000299383
Brassica carinata ChrC02 1 CH_bca_690 2 2 0.000128259
Nicotiana tabacum Nitab4.5_0000171 1 CH_nta_93 2 2 0.000109727
Olea europaea scaffold959 1 CH_oeu_153 2 2 0.0000533789
Petunia axillaris Peaxi162Scf00073 1 CH_pax_299 2 2 0.000422134
Petunia axillaris Peaxi162Scf00025 1 CH_pax_300 2 2 0.000422134
Populus trichocarpa Chr19 1 CH_ptr_70 5 11 0.000000000000811918
Quercus lobata 8 1 CH_qlo_881 2 2 0.000309773
Solanum lycopersicum SL4.0ch03 1 CH_sly_401 2 2 0.000176082
Vigna mungo CM024073.1 1 CH_vmu_102 3 5 0.000000250479
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 2 CH_arhy_570 2 2 0.000299383
Brassica carinata ChrC02 2 CH_bca_690 2 2 0.000128259
Nicotiana tabacum Nitab4.5_0000171 2 CH_nta_93 2 2 0.000109727
Olea europaea scaffold959 2 CH_oeu_153 2 2 0.0000533789
Petunia axillaris Peaxi162Scf00073 2 CH_pax_299 2 2 0.000422134
Petunia axillaris Peaxi162Scf00025 2 CH_pax_300 2 2 0.000422134
Populus trichocarpa Chr19 2 CH_ptr_70 5 11 0.000000000000811918
Quercus lobata 8 2 CH_qlo_881 2 2 0.000309773
Solanum lycopersicum SL4.0ch03 2 CH_sly_401 2 2 0.000176082
Vigna mungo CM024073.1 2 CH_vmu_102 3 5 0.000000250479

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001