Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.nucleosome remodeling.SWI/SNF chromatin remodeling complexes.plant-specific components.component G2481-1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group6 1 CH_ach_228 2 2 0.000543213
Brassica rapa A08 1 CH_bra_342 2 6 0.000643915
Camellia sinensis var. sinensis Chr14 1 CH_camsi_644 2 2 0.000137564
Corchorus olitorius AWUE01023851.1 1 CH_col_64 2 2 0.000292099
Carica papaya supercontig_29 1 CH_cpa_181 2 2 0.0000950661
Physcomitrium patens Chr20 1 CH_ppa_212 2 2 0.000367636
Sequoiadendron giganteum chr10 1 CH_sgi_1013 2 3 0.000146142
Trochodendron aralioides group0 1 CH_tar_507 2 2 0.000600366
Vigna mungo CM024069.1 1 CH_vmu_279 2 2 0.000193842
Actinidia chinensis Lachesis_group6 2 CH_ach_228 2 2 0.000543213
Brassica rapa A08 2 CH_bra_342 2 6 0.000643915
Camellia sinensis var. sinensis Chr14 2 CH_camsi_644 2 2 0.000137564
Corchorus olitorius AWUE01023851.1 2 CH_col_64 2 2 0.000292099
Carica papaya supercontig_29 2 CH_cpa_181 2 2 0.0000950661
Physcomitrium patens Chr20 2 CH_ppa_212 2 2 0.000367636
Sequoiadendron giganteum chr10 2 CH_sgi_1013 2 3 0.000146142
Trochodendron aralioides group0 2 CH_tar_507 2 2 0.000600366
Vigna mungo CM024069.1 2 CH_vmu_279 2 2 0.000193842

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001