Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.associated protein factors.histone H3 demethylase (ICU11/CP)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cardamine hirsuta Chr1 1 CH_chi_346 2 2 0.000414723
Carica papaya supercontig_65 1 CH_cpa_258 2 3 0.000285185
Capsella rubella scaffold_1 1 CH_cru_127 3 3 0.000000080191
Glycine max Gm10 1 CH_gma_545 2 2 0.000569336
Glycine max Gm20 1 CH_gma_546 2 2 0.000569336
Helianthus annuus HanXRQChr16 1 CH_han_727 2 2 0.0008115
Phaseolus vulgaris Chr07 1 CH_pvu_389 2 2 0.000440836
Sequoiadendron giganteum chr10 1 CH_sgi_447 3 3 0.0000000142393
Solanum lycopersicum SL4.0ch04 1 CH_sly_394 2 2 0.000176082
Solanum pennellii Spenn-ch04 1 CH_spe_346 2 2 0.000133437
Trochodendron aralioides group13 1 CH_tar_321 2 2 0.00018011
Vigna mungo CM024071.1 1 CH_vmu_273 2 2 0.000193842
Vanilla planifolia CM028152.1 1 CH_vpl_212 3 42 0.0000938795
Cardamine hirsuta Chr1 2 CH_chi_346 2 2 0.000414723
Carica papaya supercontig_65 2 CH_cpa_258 2 3 0.000285185
Capsella rubella scaffold_1 2 CH_cru_127 3 3 0.000000080191
Glycine max Gm10 2 CH_gma_545 2 2 0.000569336
Glycine max Gm20 2 CH_gma_546 2 2 0.000569336
Helianthus annuus HanXRQChr16 2 CH_han_727 2 2 0.0008115
Phaseolus vulgaris Chr07 2 CH_pvu_389 2 2 0.000440836
Sequoiadendron giganteum chr10 2 CH_sgi_447 3 3 0.0000000142393
Solanum lycopersicum SL4.0ch04 2 CH_sly_394 2 2 0.000176082
Solanum pennellii Spenn-ch04 2 CH_spe_346 2 2 0.000133437
Trochodendron aralioides group13 2 CH_tar_321 2 2 0.00018011
Vigna mungo CM024071.1 2 CH_vmu_273 2 2 0.000193842
Vanilla planifolia CM028152.1 2 CH_vpl_212 3 42 0.0000938795

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001