Functional clusters
Information
- Type MapMan
- Description Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.histone deacetylase (HDA8)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica napus | C08 | 1 | CH_bna_280 | 3 | 4 | 0.00000115627 |
| Cardamine hirsuta | Chr3 | 1 | CH_chi_146 | 3 | 3 | 0.000000602003 |
| Daucus carota | DCARv2_Chr4 | 1 | CH_dca_132 | 3 | 3 | 0.000000512531 |
| Malus domestica | Chr05 | 1 | CH_mdo_760 | 3 | 31 | 0.000812088 |
| Sequoiadendron giganteum | chr9 | 1 | CH_sgi_606 | 3 | 6 | 0.0000014236 |
| Cardamine hirsuta | Chr3 | 2 | CH_chi_146 | 3 | 3 | 0.000000602003 |
| Daucus carota | DCARv2_Chr4 | 2 | CH_dca_132 | 3 | 3 | 0.000000512531 |
| Malus domestica | Chr05 | 2 | CH_mdo_760 | 3 | 31 | 0.000812088 |
| Sequoiadendron giganteum | chr9 | 2 | CH_sgi_606 | 3 | 6 | 0.0000014236 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |