Functional clusters

Information

  • Type MapMan
  • Description Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.component SPT16

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_344 1 CH_aag_40 3 4 0.00000135248
Acer truncatum chr12 1 CH_acertr_426 2 2 0.000211491
Actinidia chinensis Lachesis_group12 1 CH_ach_145 2 2 0.000162964
Arabidopsis lyrata scaffold_6 1 CH_aly_389 3 78 0.000495933
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 1 CH_arhy_465 2 2 0.000089815
Camellia sinensis var. sinensis Chr3 1 CH_camsi_135 4 7 0.00000000015184
Capsicum annuum PGAv.1.6.scaffold1374 1 CH_can_346 2 2 0.000247831
Corylus avellana 2 1 CH_cav_266 2 2 0.0000766695
Citrus clementina scaffold_6 1 CH_ccl_321 2 2 0.0000820311
Carpinus fangiana Cfa02 1 CH_cfa_310 2 2 0.000227204
Carya illinoinensis Chr07 1 CH_cil_204 3 5 0.0000000576263
Davidia involucrata GWHABJS00000005 1 CH_din_424 2 2 0.000300075
Davidia involucrata GWHABJS00000002 1 CH_din_425 2 2 0.000300075
Gossypium hirsutum A13 1 CH_ghi_97 4 4 0.00000000000399803
Glycine max Gm11 1 CH_gma_454 2 2 0.000227734
Glycine max Gm18 1 CH_gma_580 2 3 0.000683172
Gossypium raimondii Chr13 1 CH_gra_313 2 2 0.000160832
Lonicera japonica GWHAAZE00000005 1 CH_lonja_476 2 2 0.000179662
Malus domestica Chr12 1 CH_mdo_566 2 2 0.000227527
Malus domestica Chr04 1 CH_mdo_567 2 2 0.000227527
Manihot esculenta Chromosome04 1 CH_mes_370 2 2 0.000183189
Prunus persica Pp06 1 CH_ppe_342 2 2 0.0000745962
Papaver somniferum NW_020620603.1 1 CH_pso_541 2 2 0.000225233
Populus trichocarpa Chr13 1 CH_ptr_442 2 2 0.000346801
Populus trichocarpa Chr05 1 CH_ptr_443 2 2 0.000346801
Phaseolus vulgaris Chr06 1 CH_pvu_294 2 2 0.0000734727
Rhododendron simsii chr11 1 CH_rsi_499 2 2 0.000387184
Salvia bowleyana GWHASIU00000005 1 CH_sbo_402 2 3 0.000409466
Salix brachista GWHAAZH00000013 1 CH_sbr_387 2 2 0.00063014
Salix brachista GWHAAZH00000005 1 CH_sbr_388 2 2 0.00063014
Solanum lycopersicum SL4.0ch01 1 CH_sly_421 2 2 0.000176082
Solanum pennellii Spenn-ch01 1 CH_spe_369 2 2 0.000133437
Solanum tuberosum ST4.03ch01 1 CH_stu_468 2 2 0.000153736
Selenicereus undatus Scaffold_33676 1 CH_sun_183 2 3 0.000217984
Trochodendron aralioides group16 1 CH_tar_111 3 5 0.0000000540643
Theobroma cacao Chromosome_5 1 CH_tca_291 2 2 0.0000732386
Trifolium pratense Tp57577_TGAC_v2_scaf_142 1 CH_tpr_238 2 2 0.0000756974
Vitis vinifera chr14 1 CH_vvi_280 2 2 0.000076063
Anthoceros agrestis Sc2ySwM_344 2 CH_aag_40 3 4 0.00000135248
Acer truncatum chr12 2 CH_acertr_426 2 2 0.000211491
Actinidia chinensis Lachesis_group12 2 CH_ach_145 2 2 0.000162964
Arabidopsis lyrata scaffold_6 2 CH_aly_389 3 78 0.000495933
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 2 CH_arhy_465 2 2 0.000089815
Camellia sinensis var. sinensis Chr3 2 CH_camsi_135 4 7 0.00000000015184
Capsicum annuum PGAv.1.6.scaffold1374 2 CH_can_346 2 2 0.000247831
Corylus avellana 2 2 CH_cav_266 2 2 0.0000766695
Citrus clementina scaffold_6 2 CH_ccl_321 2 2 0.0000820311
Carpinus fangiana Cfa02 2 CH_cfa_310 2 2 0.000227204
Carya illinoinensis Chr07 2 CH_cil_204 3 5 0.0000000576263
Davidia involucrata GWHABJS00000005 2 CH_din_424 2 2 0.000300075
Davidia involucrata GWHABJS00000002 2 CH_din_425 2 2 0.000300075
Gossypium hirsutum D13 2 CH_ghi_837 2 2 0.000747644
Gossypium hirsutum A13 2 CH_ghi_97 4 4 0.00000000000399803
Glycine max Gm11 2 CH_gma_454 2 2 0.000227734
Glycine max Gm18 2 CH_gma_580 2 3 0.000683172
Gossypium raimondii Chr13 2 CH_gra_313 2 2 0.000160832
Lonicera japonica GWHAAZE00000005 2 CH_lonja_476 2 2 0.000179662
Malus domestica Chr12 2 CH_mdo_566 2 2 0.000227527
Malus domestica Chr04 2 CH_mdo_567 2 2 0.000227527
Manihot esculenta Chromosome04 2 CH_mes_370 2 2 0.000183189
Prunus persica Pp06 2 CH_ppe_342 2 2 0.0000745962
Papaver somniferum NW_020620603.1 2 CH_pso_541 2 2 0.000225233
Populus trichocarpa Chr13 2 CH_ptr_442 2 2 0.000346801
Populus trichocarpa Chr05 2 CH_ptr_443 2 2 0.000346801
Phaseolus vulgaris Chr06 2 CH_pvu_294 2 2 0.0000734727
Rhododendron simsii chr11 2 CH_rsi_499 2 2 0.000387184
Salvia bowleyana GWHASIU00000005 2 CH_sbo_402 2 3 0.000409466
Salix brachista GWHAAZH00000013 2 CH_sbr_387 2 2 0.00063014
Salix brachista GWHAAZH00000005 2 CH_sbr_388 2 2 0.00063014
Solanum lycopersicum SL4.0ch01 2 CH_sly_421 2 2 0.000176082
Solanum pennellii Spenn-ch01 2 CH_spe_369 2 2 0.000133437
Solanum tuberosum ST4.03ch01 2 CH_stu_468 2 2 0.000153736
Selenicereus undatus Scaffold_33676 2 CH_sun_183 2 3 0.000217984
Trochodendron aralioides group16 2 CH_tar_111 3 5 0.0000000540643
Theobroma cacao Chromosome_5 2 CH_tca_291 2 2 0.0000732386
Trifolium pratense Tp57577_TGAC_v2_scaf_142 2 CH_tpr_238 2 2 0.0000756974
Vitis vinifera chr14 2 CH_vvi_280 2 2 0.000076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001