Functional clusters

Information

  • Type MapMan
  • Description Redox homeostasis.tocopherol biosynthesis.gamma-tocopherol methyltransferase (VTE4/TMT)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-2 1 CH_aar_168 2 2 0.0000912326
Acer truncatum chr12 1 CH_acertr_542 2 5 0.000704895
Aquilegia oxysepala CHR06 1 CH_aox_181 2 2 0.0000801989
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 1 CH_arhy_648 2 2 0.000449075
Amborella trichopoda AmTr_v1.0_scaffold00048 1 CH_atr_213 2 2 0.0000794407
Ceratophyllum demersum 9 1 CH_cde_289 2 2 0.000789796
Durio zibethinus NW_019168004.1 1 CH_dzi_318 2 3 0.000417124
Glycine max Gm12 1 CH_gma_390 2 2 0.000113867
Helianthus annuus HanXRQChr08 1 CH_han_305 3 11 0.00000147797
Petunia axillaris Peaxi162Scf00052 1 CH_pax_86 3 4 0.000000118795
Punica granatum NC_045128.1 1 CH_pgr_57 4 8 0.0000000000887168
Phaseolus vulgaris Chr11 1 CH_pvu_307 2 2 0.0000734727
Quercus lobata 9 1 CH_qlo_959 2 5 0.000516249
Salvia bowleyana GWHASIU00000006 1 CH_sbo_180 3 12 0.000000682997
Selenicereus undatus Scaffold_33678 1 CH_sun_217 2 2 0.000217992
Vigna mungo CM024076.1 1 CH_vmu_225 2 2 0.0000646141
Aethionema arabicum LG-2 2 CH_aar_168 2 2 0.0000912326
Acer truncatum chr12 2 CH_acertr_542 2 5 0.000704895
Aquilegia oxysepala CHR06 2 CH_aox_181 2 2 0.0000801989
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 2 CH_arhy_648 2 2 0.000449075
Amborella trichopoda AmTr_v1.0_scaffold00048 2 CH_atr_213 2 2 0.0000794407
Ceratophyllum demersum 9 2 CH_cde_289 2 2 0.000789796
Durio zibethinus NW_019168004.1 2 CH_dzi_318 2 3 0.000417124
Glycine max Gm12 2 CH_gma_390 2 2 0.000113867
Helianthus annuus HanXRQChr08 2 CH_han_305 3 11 0.00000147797
Petunia axillaris Peaxi162Scf00052 2 CH_pax_86 3 4 0.000000118795
Punica granatum NC_045128.1 2 CH_pgr_57 4 8 0.0000000000887168
Phaseolus vulgaris Chr11 2 CH_pvu_307 2 2 0.0000734727
Quercus lobata 9 2 CH_qlo_959 2 5 0.000516249
Salvia bowleyana GWHASIU00000006 2 CH_sbo_180 3 12 0.000000682997
Selenicereus undatus Scaffold_33678 2 CH_sun_217 2 2 0.000217992
Vigna mungo CM024076.1 2 CH_vmu_225 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001