Functional clusters

Information

  • Type MapMan
  • Description Redox homeostasis.ascorbate-based redox regulation.ascorbate metabolism.L-galactose biosynthesis pathway.L-galactose-1-phosphate phosphatase (VTC4)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_18782_HRSCAF_18867 1 CH_ama_84 2 2 0.000258665
Camellia sinensis var. sinensis Chr8 1 CH_camsi_795 2 5 0.000458516
Helianthus annuus HanXRQChr17 1 CH_han_617 2 3 0.000347775
Populus trichocarpa Chr10 1 CH_ptr_426 2 2 0.000346801
Tripterygium wilfordii NC_052240.1 1 CH_twi_209 2 2 0.000167252
Avicennia marina ScioBoG_18782_HRSCAF_18867 2 CH_ama_84 2 2 0.000258665
Camellia sinensis var. sinensis Chr8 2 CH_camsi_795 2 5 0.000458516
Helianthus annuus HanXRQChr17 2 CH_han_617 2 3 0.000347775
Populus trichocarpa Chr10 2 CH_ptr_426 2 2 0.000346801
Tripterygium wilfordii NC_052240.1 2 CH_twi_209 2 2 0.000167252

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001