Functional clusters

Information

  • Type MapMan
  • Description Redox homeostasis.ascorbate-based redox regulation.dehydroascorbate reductase (DHAR)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Carya illinoinensis Chr01 1 CH_cil_497 2 2 0.000371897
Erigeron canadensis Conyza_canadensis_scaffold:1 1 CH_eca_371 2 2 0.000134617
Fragaria x ananassa Fvb7-4 1 CH_fan_172 3 4 0.000000451918
Fragaria vesca Fvb7 1 CH_fve_415 2 2 0.000353461
Lactuca sativa Lsat_1_v8_lg_8 1 CH_lsa_411 2 2 0.000154202
Pisum sativum chr3LG5 1 CH_psa_341 2 2 0.000312981
Papaver somniferum NC_039366.1 1 CH_pso_236 4 22 0.0000000826377
Papaver somniferum NC_039368.1 1 CH_pso_309 3 5 0.00000125538
Rhododendron simsii chr09 1 CH_rsi_192 4 26 0.000000180465
Striga asiatica scaffold45 1 CH_sas_69 2 2 0.0000625371
Simmondsia chinensis GWHAASQ00000007 1 CH_sci_177 2 2 0.0000851426
Sechium edule LG07 1 CH_sed_80 3 3 0.0000000763478
Zea mays 8 1 CH_zma_228 2 2 0.000306788
Carya illinoinensis Chr01 2 CH_cil_497 2 2 0.000371897
Erigeron canadensis Conyza_canadensis_scaffold:1 2 CH_eca_371 2 2 0.000134617
Fragaria x ananassa Fvb7-4 2 CH_fan_172 3 4 0.000000451918
Fragaria vesca Fvb7 2 CH_fve_415 2 2 0.000353461
Lactuca sativa Lsat_1_v8_lg_8 2 CH_lsa_411 2 2 0.000154202
Pisum sativum chr3LG5 2 CH_psa_341 2 2 0.000312981
Papaver somniferum NC_039366.1 2 CH_pso_236 4 22 0.0000000826377
Papaver somniferum NC_039368.1 2 CH_pso_309 3 5 0.00000125538
Rhododendron simsii chr09 2 CH_rsi_192 4 26 0.000000180465
Striga asiatica scaffold45 2 CH_sas_69 2 2 0.0000625371
Simmondsia chinensis GWHAASQ00000007 2 CH_sci_177 2 2 0.0000851426
Sechium edule LG07 2 CH_sed_80 3 3 0.0000000763478
Zea mays 8 2 CH_zma_228 2 2 0.000306788

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001