Functional clusters

Information

  • Type MapMan
  • Description Photosynthesis.photorespiration.glycolate oxidase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_3 1 CH_aly_383 2 2 0.000396027
Arabidopsis thaliana Chr3 1 CH_ath_278 2 2 0.0000859476
Brassica carinata ChrC09 1 CH_bca_1107 2 2 0.000769551
Brassica oleracea C5 1 CH_bol_388 2 2 0.000490292
Brassica rapa A01 1 CH_bra_387 2 2 0.000901558
Brassica rapa A03 1 CH_bra_388 2 2 0.000901558
Camellia sinensis var. sinensis Chr8 1 CH_camsi_835 2 2 0.000458547
Cicer arietinum L. Ca_LG6_v3 1 CH_car_279 2 2 0.000466981
Cardamine hirsuta Chr3 1 CH_chi_377 2 2 0.000414723
Chenopodium quinoa C_Quinoa_Scaffold_1000 1 CH_cqu_459 2 2 0.000284293
Capsella rubella scaffold_3 1 CH_cru_387 2 2 0.000438693
Erythranthe guttata scaffold_13 1 CH_egut_377 2 2 0.000218444
Eutrema salsugineum scaffold_13 1 CH_esa_292 2 2 0.000456899
Glycine max Gm08 1 CH_gma_199 3 7 0.000000756205
Gossypium raimondii Chr02 1 CH_gra_376 2 2 0.000321664
Olea europaea chr16 1 CH_oeu_326 2 2 0.000320273
Rosa chinensis RcHm_v2.0_Chr6 1 CH_rch_292 3 5 0.000000238367
Rhododendron simsii chr13 1 CH_rsi_458 2 2 0.000193592
Sequoiadendron giganteum chr8 1 CH_sgi_1294 2 5 0.000487116
Schrenkiella parvula ch3-1 1 CH_spa_234 2 2 0.000236202
Trifolium pratense Tp57577_TGAC_v2_LG3 1 CH_tpr_257 2 2 0.0000756974
Arabidopsis lyrata scaffold_3 2 CH_aly_383 2 2 0.000396027
Arabidopsis thaliana Chr3 2 CH_ath_278 2 2 0.0000859476
Brassica carinata ChrC09 2 CH_bca_1107 2 2 0.000769551
Brassica oleracea C5 2 CH_bol_388 2 2 0.000490292
Brassica rapa A01 2 CH_bra_387 2 2 0.000901558
Brassica rapa A03 2 CH_bra_388 2 2 0.000901558
Camellia sinensis var. sinensis Chr8 2 CH_camsi_835 2 2 0.000458547
Cicer arietinum L. Ca_LG6_v3 2 CH_car_279 2 2 0.000466981
Cardamine hirsuta Chr3 2 CH_chi_377 2 2 0.000414723
Chenopodium quinoa C_Quinoa_Scaffold_1000 2 CH_cqu_459 2 2 0.000284293
Capsella rubella scaffold_3 2 CH_cru_387 2 2 0.000438693
Erythranthe guttata scaffold_13 2 CH_egut_377 2 2 0.000218444
Eutrema salsugineum scaffold_13 2 CH_esa_292 2 2 0.000456899
Gossypium hirsutum D01 2 CH_ghi_852 2 2 0.000747644
Glycine max Gm08 2 CH_gma_199 3 7 0.000000756205
Gossypium raimondii Chr02 2 CH_gra_376 2 2 0.000321664
Olea europaea chr16 2 CH_oeu_326 2 2 0.000320273
Rosa chinensis RcHm_v2.0_Chr6 2 CH_rch_292 3 5 0.000000238367
Rhododendron simsii chr13 2 CH_rsi_458 2 2 0.000193592
Sequoiadendron giganteum chr8 2 CH_sgi_1294 2 5 0.000487116
Schrenkiella parvula ch3-1 2 CH_spa_234 2 2 0.000236202
Trifolium pratense Tp57577_TGAC_v2_LG3 2 CH_tpr_257 2 2 0.0000756974

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001