Functional clusters

Information

  • Type MapMan
  • Description Photosynthesis.photophosphorylation.linear electron flow.ferredoxin electron carrier activities.NADP-reduction-targeted ferredoxin (Fd)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr1 1 CH_camsi_972 2 2 0.000962949
Cannabis sativa NC_044377.1 1 CH_cansat_150 3 6 0.00000129326
Capsicum annuum PGAv.1.6.scaffold798 1 CH_can_164 3 4 0.000000818863
Corylus avellana 1 1 CH_cav_410 2 2 0.000460017
Coffea canephora chr1 1 CH_ccan_220 2 3 0.00007666
Citrus clementina scaffold_5 1 CH_ccl_478 2 2 0.000820311
Citrus clementina scaffold_2 1 CH_ccl_479 2 2 0.000820311
Citrullus lanatus CG_Chr05 1 CH_cla_197 2 2 0.000532269
Cucumis melo chr06 1 CH_cme_113 3 6 0.00000133482
Cucumis sativus L. chr3 1 CH_csa_294 2 2 0.000500856
Erigeron canadensis Conyza_canadensis_scaffold:4 1 CH_eca_385 2 2 0.000269233
Glycine max Gm12 1 CH_gma_176 3 3 0.000000259319
Helianthus annuus HanXRQChr10 1 CH_han_728 2 2 0.0008115
Magnolia biondii Chr09 1 CH_mbi_440 2 2 0.000145698
Manihot esculenta Chromosome07 1 CH_mes_177 3 3 0.000000195763
Physcomitrium patens Chr04 1 CH_ppa_68 3 9 0.0000264683
Pisum sativum chr7LG7 1 CH_psa_395 2 2 0.000782452
Pisum sativum chr6LG2 1 CH_psa_396 2 2 0.000782452
Phaseolus vulgaris Chr06 1 CH_pvu_130 3 3 0.0000000809765
Selenicereus undatus Scaffold_33676 1 CH_sun_178 2 3 0.000217984
Tripterygium wilfordii NC_052252.1 1 CH_twi_278 2 2 0.000557507
Vigna mungo CM024075.1 1 CH_vmu_30 4 4 0.0000000000121405
Camellia sinensis var. sinensis Chr1 2 CH_camsi_972 2 2 0.000962949
Cannabis sativa NC_044377.1 2 CH_cansat_150 3 6 0.00000129326
Capsicum annuum PGAv.1.6.scaffold798 2 CH_can_164 3 4 0.000000818863
Corylus avellana 1 2 CH_cav_410 2 2 0.000460017
Coffea canephora chr1 2 CH_ccan_220 2 3 0.00007666
Citrus clementina scaffold_5 2 CH_ccl_478 2 2 0.000820311
Citrus clementina scaffold_2 2 CH_ccl_479 2 2 0.000820311
Citrullus lanatus CG_Chr05 2 CH_cla_197 2 2 0.000532269
Cucumis melo chr06 2 CH_cme_113 3 6 0.00000133482
Cucumis sativus L. chr3 2 CH_csa_294 2 2 0.000500856
Erigeron canadensis Conyza_canadensis_scaffold:4 2 CH_eca_385 2 2 0.000269233
Glycine max Gm12 2 CH_gma_176 3 3 0.000000259319
Helianthus annuus HanXRQChr10 2 CH_han_728 2 2 0.0008115
Magnolia biondii Chr09 2 CH_mbi_440 2 2 0.000145698
Manihot esculenta Chromosome07 2 CH_mes_177 3 3 0.000000195763
Physcomitrium patens Chr04 2 CH_ppa_68 3 9 0.0000264683
Pisum sativum chr7LG7 2 CH_psa_395 2 2 0.000782452
Pisum sativum chr6LG2 2 CH_psa_396 2 2 0.000782452
Phaseolus vulgaris Chr06 2 CH_pvu_130 3 3 0.0000000809765
Selenicereus undatus Scaffold_33676 2 CH_sun_178 2 3 0.000217984
Tripterygium wilfordii NC_052252.1 2 CH_twi_278 2 2 0.000557507
Vigna mungo CM024075.1 2 CH_vmu_30 4 4 0.0000000000121405

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001