Functional clusters
Information
- Type MapMan
- Description Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.acclimation factor activities.acclimation factor (APE)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Corylus avellana | 5 | 1 | CH_cav_227 | 2 | 2 | 0.0000766695 |
Carica papaya | supercontig_179 | 1 | CH_cpa_154 | 2 | 2 | 0.0000950661 |
Hydrangea macrophylla | Hma1.2p1_0550F.1 | 1 | CH_hma_117 | 2 | 2 | 0.000111086 |
Magnolia biondii | Chr09 | 1 | CH_mbi_495 | 2 | 4 | 0.000291382 |
Phaseolus vulgaris | Chr04 | 1 | CH_pvu_129 | 3 | 5 | 0.0000000809706 |
Corylus avellana | 5 | 2 | CH_cav_227 | 2 | 2 | 0.0000766695 |
Carica papaya | supercontig_179 | 2 | CH_cpa_154 | 2 | 2 | 0.0000950661 |
Hydrangea macrophylla | Hma1.2p1_0550F.1 | 2 | CH_hma_117 | 2 | 2 | 0.000111086 |
Magnolia biondii | Chr09 | 2 | CH_mbi_495 | 2 | 4 | 0.000291382 |
Phaseolus vulgaris | Chr04 | 2 | CH_pvu_129 | 3 | 5 | 0.0000000809706 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |