Functional clusters

Information

  • Type MapMan
  • Description Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.thylakoid grana stacking.regulatory factor (CURT)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Chara braunii BFEA01000106 1 CH_cbr_81 2 3 0.000215773
Sequoiadendron giganteum chr11 1 CH_sgi_1338 3 36 0.000507018
Utricularia gibba unitig_62 1 CH_ugi_244 3 33 0.00044043
Vanilla planifolia CM028161.1 1 CH_vpl_112 3 11 0.0000135026
Chara braunii BFEA01000106 2 CH_cbr_81 2 3 0.000215773
Sequoiadendron giganteum chr11 2 CH_sgi_1338 3 36 0.000507018
Utricularia gibba unitig_62 2 CH_ugi_244 3 33 0.00044043
Vanilla planifolia CM028161.1 2 CH_vpl_112 3 11 0.0000135026

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001