Functional clusters
Information
- Type MapMan
- Description Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.non-photochemical quenching (NPQ).qH-type antenna quenching.NPQ-regulatory protein (ROQH1)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 1 | CH_arhy_757 | 2 | 5 | 0.000898083 |
| Camellia sinensis var. sinensis | Chr13 | 1 | CH_camsi_783 | 2 | 5 | 0.000458516 |
| Magnolia biondii | Chr13 | 1 | CH_mbi_431 | 2 | 2 | 0.000145698 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 2 | CH_arhy_757 | 2 | 5 | 0.000898083 |
| Camellia sinensis var. sinensis | Chr13 | 2 | CH_camsi_783 | 2 | 5 | 0.000458516 |
| Magnolia biondii | Chr13 | 2 | CH_mbi_431 | 2 | 2 | 0.000145698 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |