Functional clusters

Information

  • Type MapMan
  • Description Photosynthesis.photophosphorylation.photosystem II.repair and reassembly cycle.photoprotective factor (MPH1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC03 1 CH_bca_1043 2 3 0.000641272
Brassica carinata ChrB05 1 CH_bca_1044 2 3 0.000641272
Hydrangea macrophylla Hma1.2p1_0233F.1 1 CH_hma_154 2 2 0.000111086
Magnolia biondii Chr03 1 CH_mbi_401 2 3 0.000145695
Brassica carinata ChrC03 2 CH_bca_1043 2 3 0.000641272
Brassica carinata ChrB05 2 CH_bca_1044 2 3 0.000641272
Hydrangea macrophylla Hma1.2p1_0233F.1 2 CH_hma_154 2 2 0.000111086
Magnolia biondii Chr03 2 CH_mbi_401 2 3 0.000145695

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001