Functional clusters

Information

  • Type MapMan
  • Description Photosynthesis.photophosphorylation.photosystem II.assembly.chaperone-like assembly factor (SCO2/CYO1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Erigeron canadensis Conyza_canadensis_scaffold:5 1 CH_eca_326 2 3 0.000134614
Rhododendron simsii chr11 1 CH_rsi_330 2 2 0.0000645307
Sequoiadendron giganteum chr11 1 CH_sgi_777 2 2 0.0000487151
Solanum pennellii Spenn-ch10 1 CH_spe_524 2 4 0.000800563
Erigeron canadensis Conyza_canadensis_scaffold:5 2 CH_eca_326 2 3 0.000134614
Rhododendron simsii chr11 2 CH_rsi_330 2 2 0.0000645307
Sequoiadendron giganteum chr11 2 CH_sgi_777 2 2 0.0000487151
Solanum pennellii Spenn-ch10 2 CH_spe_524 2 4 0.000800563

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001