Functional clusters

Information

  • Type MapMan
  • Description Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbTn

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cicer arietinum L. Ca_LG5_v3 1 CH_car_148 2 2 0.0000778301
Glycine max Gm10 1 CH_gma_422 2 2 0.000227734
Glycine max Gm15 1 CH_gma_423 2 2 0.000227734
Medicago truncatula chr3 1 CH_mtr_598 2 2 0.000123259
Nelumbo nucifera chr7 1 CH_nnu_317 2 2 0.000130804
Petunia axillaris Peaxi162Scf00032 1 CH_pax_332 2 3 0.000633164
Physcomitrium patens Chr05 1 CH_ppa_128 2 3 0.000183812
Trifolium pratense Tp57577_TGAC_v2_LG3 1 CH_tpr_300 2 2 0.000227092
Cicer arietinum L. Ca_LG5_v3 2 CH_car_148 2 2 0.0000778301
Glycine max Gm10 2 CH_gma_422 2 2 0.000227734
Glycine max Gm15 2 CH_gma_423 2 2 0.000227734
Nelumbo nucifera chr7 2 CH_nnu_317 2 2 0.000130804
Petunia axillaris Peaxi162Scf00032 2 CH_pax_332 2 3 0.000633164
Physcomitrium patens Chr05 2 CH_ppa_128 2 3 0.000183812
Trifolium pratense Tp57577_TGAC_v2_LG3 2 CH_tpr_300 2 2 0.000227092

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001