Functional clusters

Information

  • Type MapMan
  • Description Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.component LHCb6

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold523 1 CH_can_381 2 4 0.000495622
Daucus carota DCARv2_Chr9 1 CH_dca_281 2 2 0.000191333
Physcomitrium patens Chr01 1 CH_ppa_77 2 2 0.0000612726
Sechium edule LG10 1 CH_sed_195 2 2 0.0000713419
Solanum lycopersicum SL4.0ch01 1 CH_sly_454 2 4 0.000352144
Solanum pennellii Spenn-ch01 1 CH_spe_335 2 3 0.000133434
Solanum tuberosum ST4.03ch01 1 CH_stu_435 2 3 0.000153732
Capsicum annuum PGAv.1.6.scaffold523 2 CH_can_381 2 4 0.000495622
Daucus carota DCARv2_Chr9 2 CH_dca_281 2 2 0.000191333
Physcomitrium patens Chr01 2 CH_ppa_77 2 2 0.0000612726
Sechium edule LG10 2 CH_sed_195 2 2 0.0000713419
Solanum lycopersicum SL4.0ch01 2 CH_sly_454 2 4 0.000352144
Solanum pennellii Spenn-ch01 2 CH_spe_335 2 3 0.000133434
Solanum tuberosum ST4.03ch01 2 CH_stu_435 2 3 0.000153732

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001