Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p33040 Brassica napus
Actinidia30505 Actinidia chinensis
AL3G36260 Arabidopsis lyrata
Aqoxy4G02125 Aquilegia oxysepala
AT3G22070 Arabidopsis thaliana
BcaB04g20549 Brassica carinata
BolC1t04180H Brassica oleracea
BraA01t03426Z Brassica rapa
C01p42180 Brassica napus
C05p41370 Brassica napus
CANSAT64G1524 Cannabis sativa
CARHR097930 Cardamine hirsuta
Carub.0003s2223 Capsella rubella
Ca_01568_v3 Cicer arietinum L.
Cc00_g19250 Coffea canephora
CDE05G0218 Ceratophyllum demersum
Cfa014449 Carpinus fangiana
Cfa014450 Carpinus fangiana
Cfa021131 Carpinus fangiana
Cfa021551 Carpinus fangiana
Ciclev10017097m.g Citrus clementina
CiPaw.03G163700 Carya illinoinensis
CiPaw.04G118600 Carya illinoinensis
COL.COLO4_13003 Corchorus olitorius
Cpa.g.sc8.247 Carica papaya
CSS0007715 Camellia sinensis var. sinensis
CSS0046432 Camellia sinensis var. sinensis
DCAR_012961 Daucus carota
DCAR_021195 Daucus carota
Dinv10909 Davidia involucrata
ECA246G5319 Erigeron canadensis
EL10Ac3g05472 Beta vulgaris
FAN02G1687 Fragaria x ananassa
FAN05G3706 Fragaria x ananassa
FAN09G3630 Fragaria x ananassa
FAN14G2245 Fragaria x ananassa
FvH4_6g43650 Fragaria vesca
Glyma.12G103000 Glycine max
Glyma.12G197200 Glycine max
Glyma.13G305400 Glycine max
Gohir.A04G107200 Gossypium hirsutum
Gohir.A12G135100 Gossypium hirsutum
Gohir.D04G147200 Gossypium hirsutum
Gohir.D12G138800 Gossypium hirsutum
Gorai.008G150200 Gossypium raimondii
Gorai.012G133100 Gossypium raimondii
HanXRQChr17g0563901 Helianthus annuus
HPP92_005903 Vanilla planifolia
HPP92_009398 Vanilla planifolia
Lalb_Chr19g0135631 Lupinus albus
Lalb_Chr24g0393541 Lupinus albus
Lj3g0010205 Lotus japonicus
Lsat_1_v5_gn_3_43341 Lactuca sativa
Lsat_1_v5_gn_8_129821 Lactuca sativa
Manes.07G029300 Manihot esculenta
Manes.10G111600 Manihot esculenta
Medtr2g089010 Medicago truncatula
MELO3C018795.2 Cucumis melo
Migut.H01214 Erythranthe guttata
MSTRG.12290 Avicennia marina
Nitab4.5_0002949g0070 Nicotiana tabacum
Nitab4.5_0017430g0010 Nicotiana tabacum
Nn1g06962 Nelumbo nucifera
Oeu011075.1 Olea europaea
Oeu041963.1 Olea europaea
Peaxi162Scf00007g01310 Petunia axillaris
PGSC0003DMG400026167 Solanum tuberosum
Phvul.005G112200 Phaseolus vulgaris
Potri.007G120101 Populus trichocarpa
Prupe.3G221700 Prunus persica
Psat5g265520 Pisum sativum
PSO210G2314 Papaver somniferum
QL08p033993 Quercus lobata
RcHm_v2.0_Chr2g0160271 Rosa chinensis
Rhsim06G0156700 Rhododendron simsii
Sabra07G0097600 Salix brachista
Sabra17G0027500 Salix brachista
Sc21g0001790 Simmondsia chinensis
Sed0000870 Sechium edule
Sed0005014 Sechium edule
SGA_v2.0_scaffold49G18329 Striga asiatica
SGA_v2.0_scaffold70G23427 Striga asiatica
SHI10279 Sapria himalayana
Solyc07g052680.1 Solanum lycopersicum
Sopen07g026300 Solanum pennellii
Sp3g19900 Schrenkiella parvula
THA.LOC104802538 Tarenaya hassleriana
Thecc.02G163100 Theobroma cacao
TWI18G0657 Tripterygium wilfordii
TWI36G1428 Tripterygium wilfordii
unitig_749.g13945 Utricularia gibba
VMungo0331G0946 Vigna mungo
VMungo1080G1091 Vigna mungo

User provided reference genes

Program Settings