Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p39080 Brassica napus
Aa31LG8G1950 Aethionema arabicum
Ah.01g016100 Amaranthus hybridus
AL3G27040 Arabidopsis lyrata
Aqoxy6G00368 Aquilegia oxysepala
AT3G14730 Arabidopsis thaliana
ATR1127G078 Amborella trichopoda
AUR62023992 Chenopodium quinoa
AUR62031791 Chenopodium quinoa
BcaC09g48443 Brassica carinata
BolC1t04927H Brassica oleracea
BraA01t03955Z Brassica rapa
C01p49710 Brassica napus
CAN.G555.6 Capsicum annuum
CANSAT25G0356 Cannabis sativa
CARHR089670 Cardamine hirsuta
Carub.0003s1440 Capsella rubella
Ca_18280_v3 Cicer arietinum L.
Cc10_g15700 Coffea canephora
Cfa010613 Carpinus fangiana
Ciclev10024593m.g Citrus clementina
CiPaw.11G071900 Carya illinoinensis
ClCG01G007280 Citrullus lanatus
ClCG04G003540 Citrullus lanatus
COL.COLO4_15731 Corchorus olitorius
Cpa.g.sc10.65 Carica papaya
CsaV3_4G028930 Cucumis sativus L.
CsaV3_5G018730 Cucumis sativus L.
CSS0028516 Camellia sinensis var. sinensis
CSS0031160 Camellia sinensis var. sinensis
CSS0033831 Camellia sinensis var. sinensis
DCAR_018027 Daucus carota
Dinv32284 Davidia involucrata
Duzib160G0409 Durio zibethinus
ECA236G0398 Erigeron canadensis
EL10Ac9g21033 Beta vulgaris
FAN07G0177 Fragaria x ananassa
FAN12G0335 Fragaria x ananassa
FAN12G3840 Fragaria x ananassa
FAN22G1785 Fragaria x ananassa
Glyma.08G233900 Glycine max
Glyma.13G150300 Glycine max
Gohir.A05G118700 Gossypium hirsutum
Gohir.D05G119600 Gossypium hirsutum
Gorai.009G123200 Gossypium raimondii
GSVIVG01021403001 Vitis vinifera
HanXRQChr05g0141041 Helianthus annuus
Haze_03545 Corylus avellana
Hma1.2p1_4100F.1_g338290 Hydrangea macrophylla
HPP92_019045 Vanilla planifolia
Lalb_Chr06g0163491 Lupinus albus
Lj4g0004788 Lotus japonicus
Lj6C280T7 Lonicera japonica
Lsat_1_v5_gn_8_69101 Lactuca sativa
Manes.17G068700 Manihot esculenta
MBI15_g31028_MAGBIO Magnolia biondii
MD05G1289700 Malus domestica
Medtr4g094592 Medicago truncatula
MELO3C005180.2 Cucumis melo
MELO3C019181.2 Cucumis melo
Migut.J01659 Erythranthe guttata
Nitab4.5_0000491g0160 Nicotiana tabacum
Nitab4.5_0007929g0030 Nicotiana tabacum
Nn4g25178 Nelumbo nucifera
Oeu022967.1 Olea europaea
Os01g0818200 Oryza sativa ssp. japonica
Peaxi162Scf00046g00013 Petunia axillaris
Peaxi162Scf00119g01016 Petunia axillaris
PGR119G2481 Punica granatum
PGSC0003DMG400018009 Solanum tuberosum
Phvul.002G197300 Phaseolus vulgaris
Potri.006G090900 Populus trichocarpa
Prupe.4G076000 Prunus persica
Psat2g076440 Pisum sativum
Psat7g092120 Pisum sativum
QL08p055211 Quercus lobata
QL08p055261 Quercus lobata
QL09p016243 Quercus lobata
RcHm_v2.0_Chr7g0219901 Rosa chinensis
Rhsim01G0113800 Rhododendron simsii
Sabra06G0068700 Salix brachista
SalBow6G1391 Salvia bowleyana
Sc05g0006480 Simmondsia chinensis
Sed0001052 Sechium edule
Sed0022870 Sechium edule
SGA_v2.0_scaffold105G30295 Striga asiatica
Solyc07g008480.3 Solanum lycopersicum
Sopen07g004410 Solanum pennellii
Sp3g12960 Schrenkiella parvula
TAR623G0361 Trochodendron aralioides
THA.LOC104815579 Tarenaya hassleriana
Thecc.06G042400 Theobroma cacao
Thhalv10022360m.g Eutrema salsugineum
TPR.G4862 Trifolium pratense
unitig_26.g9240 Utricularia gibba
vmacro20796 Vaccinium macrocarpon
VMungo0251G3423 Vigna mungo
Zm00001eb149700 Zea mays

User provided reference genes

Program Settings