Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p07190 Brassica napus
A08p18930 Brassica napus
Aa31LG2G19330 Aethionema arabicum
Aa31LG2G19340 Aethionema arabicum
Actinidia38680 Actinidia chinensis
AL2G22600 Arabidopsis lyrata
AL6G46700 Arabidopsis lyrata
AL7G21080 Arabidopsis lyrata
Aqoxy7G03467 Aquilegia oxysepala
AT4G30993 Arabidopsis thaliana
ATR1153G020 Amborella trichopoda
Atru.chr7.146 Acer truncatum
BcaC09g51887 Brassica carinata
BcaNung03423 Brassica carinata
BolC1t00782H Brassica oleracea
BolC4t23558H Brassica oleracea
BraA01t00670Z Brassica rapa
C01p07950 Brassica napus
C04p20200 Brassica napus
CAN.G551.28 Capsicum annuum
CANSAT11G2322 Cannabis sativa
CARHR238890 Cardamine hirsuta
Carub.0007s0954 Capsella rubella
Cc06_g15260 Coffea canephora
CDE06G1077 Ceratophyllum demersum
Ciclev10009097m.g Citrus clementina
CiPaw.16G115000 Carya illinoinensis
ClCG02G017140 Citrullus lanatus
COL.COLO4_18774 Corchorus olitorius
Cpa.g.sc46.125 Carica papaya
CsaV3_2G003640 Cucumis sativus L.
CSS0014498 Camellia sinensis var. sinensis
DCAR_014819 Daucus carota
Dinv41400 Davidia involucrata
Duzib150G0133 Durio zibethinus
Eucgr.C00366 Eucalyptus grandis
FAN19G0469 Fragaria x ananassa
FAN28G0267 Fragaria x ananassa
FvH4_1g01190 Fragaria vesca
Glyma.15G205500 Glycine max
Gohir.A07G026200 Gossypium hirsutum
Gohir.D07G030100 Gossypium hirsutum
Gorai.001G031300 Gossypium raimondii
GSVIVG01003733001 Vitis vinifera
GSVIVG01003739001 Vitis vinifera
HanXRQChr05g0133261 Helianthus annuus
HanXRQChr14g0462751 Helianthus annuus
Haze_19237 Corylus avellana
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla
HPP92_017493 Vanilla planifolia
Lj6g0006451 Lotus japonicus
Lsat_1_v5_gn_8_59821 Lactuca sativa
Manes.14G112000 Manihot esculenta
MBI14_g05269_MAGBIO Magnolia biondii
MD02G1010000 Malus domestica
MD02G1010100 Malus domestica
Medtr2g450220 Medicago truncatula
MELO3C004431.2 Cucumis melo
Migut.J01329 Erythranthe guttata
MSTRG.6118 Avicennia marina
Nitab4.5_0000273g0210 Nicotiana tabacum
Nitab4.5_0000525g0300 Nicotiana tabacum
Nitab4.5_0001478g0120 Nicotiana tabacum
Nitab4.5_0001478g0160 Nicotiana tabacum
Nitab4.5_0002197g0030 Nicotiana tabacum
Nitab4.5_0002315g0060 Nicotiana tabacum
Nitab4.5_0008862g0010 Nicotiana tabacum
Nn2g12305 Nelumbo nucifera
Oeu021253.1 Olea europaea
Oeu043496.1 Olea europaea
Oeu043497.1 Olea europaea
Os06g0183700 Oryza sativa ssp. japonica
Peaxi162Scf00108g00714 Petunia axillaris
PGR142G2789 Punica granatum
PGSC0003DMG400007894 Solanum tuberosum
Potri.006G187500 Populus trichocarpa
Potri.018G110300 Populus trichocarpa
Prupe.7G260000 Prunus persica
QL02p092630 Quercus lobata
RcHm_v2.0_Chr2g0085991 Rosa chinensis
Sabra18G0093300 Salix brachista
SalBow1G0452 Salvia bowleyana
SEGI_08057 Sequoiadendron giganteum
SEGI_14295 Sequoiadendron giganteum
SEGI_34200 Sequoiadendron giganteum
SEGI_37131 Sequoiadendron giganteum
SEGI_37647 Sequoiadendron giganteum
SEGI_38414 Sequoiadendron giganteum
SEGI_40030 Sequoiadendron giganteum
SGA_v2.0_scaffold107G30746 Striga asiatica
SGA_v2.0_scaffold113G31772 Striga asiatica
SGA_v2.0_scaffold214G42289 Striga asiatica
SGA_v2.0_scaffold265G46124 Striga asiatica
SGA_v2.0_scaffold68G22893 Striga asiatica
Solyc12g010230.2 Solanum lycopersicum
Sopen12g005120 Solanum pennellii
Sp7g28870 Schrenkiella parvula
THA.LOC104803568 Tarenaya hassleriana
Thecc.09G033900 Theobroma cacao
Thhalv10025917m.g Eutrema salsugineum
TWI34G0508 Tripterygium wilfordii
vmacro06093 Vaccinium macrocarpon
Zm00001eb374750 Zea mays

User provided reference genes

Program Settings