Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia04238 Actinidia chinensis
Actinidia21918 Actinidia chinensis
Ah.14g078860 Amaranthus hybridus
Aqoxy7G03558 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5L22XG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L2N39S Arachis hypogaea
Atru.chr7.275 Acer truncatum
AUR62011243 Chenopodium quinoa
AUR62041460 Chenopodium quinoa
CAN.G877.9 Capsicum annuum
CANSAT11G2087 Cannabis sativa
Cc06_g07510 Coffea canephora
CDE05G1811 Ceratophyllum demersum
CiPaw.15G183400 Carya illinoinensis
CiPaw.16G118400 Carya illinoinensis
ClCG06G011960 Citrullus lanatus
COL.COLO4_24126 Corchorus olitorius
Cpa.g.sc46.77 Carica papaya
CsaV3_1G028420 Cucumis sativus L.
CSS0039366 Camellia sinensis var. sinensis
DCAR_014921 Daucus carota
DCAR_017766 Daucus carota
Dinv41432 Davidia involucrata
Dinv43178 Davidia involucrata
ECA236G3490 Erigeron canadensis
ECA240G3592 Erigeron canadensis
EL10Ac8g18805 Beta vulgaris
Eucgr.C04106 Eucalyptus grandis
FAN19G1896 Fragaria x ananassa
FAN26G0562 Fragaria x ananassa
FAN28G1648 Fragaria x ananassa
FvH4_1g01840 Fragaria vesca
Glyma.13G165000 Glycine max
Glyma.17G106100 Glycine max
Gohir.A05G012100 Gossypium hirsutum
Gohir.D05G013100 Gossypium hirsutum
Gorai.009G013100 Gossypium raimondii
GSVIVG01012874001 Vitis vinifera
HanXRQChr05g0139641 Helianthus annuus
HanXRQChr06g0180381 Helianthus annuus
HanXRQChr09g0243101 Helianthus annuus
HPP92_017273 Vanilla planifolia
Hund21601 Selenicereus undatus
Lalb_Chr07g0179441 Lupinus albus
Lalb_Chr13g0301271 Lupinus albus
Lj6g0015094 Lotus japonicus
Lsat_1_v5_gn_0_45900 Lactuca sativa
Lsat_1_v5_gn_7_45981 Lactuca sativa
Lsat_1_v5_gn_7_46780 Lactuca sativa
Lsat_1_v5_gn_8_63020 Lactuca sativa
Manes.06G043400 Manihot esculenta
Manes.14G120200 Manihot esculenta
MBI14_g03622_MAGBIO Magnolia biondii
MBI15_g28791_MAGBIO Magnolia biondii
MD02G1016300 Malus domestica
MD15G1160900 Malus domestica
Medtr2g450420 Medicago truncatula
Medtr4g116360 Medicago truncatula
Migut.J01263 Erythranthe guttata
Migut.K00385 Erythranthe guttata
MSTRG.6086 Avicennia marina
Nitab4.5_0003305g0020 Nicotiana tabacum
Nitab4.5_0008829g0020 Nicotiana tabacum
Nn2g12220 Nelumbo nucifera
Nn8g39681 Nelumbo nucifera
Oeu051709.1 Olea europaea
Oeu055924.1 Olea europaea
Peaxi162Scf00088g00016 Petunia axillaris
Peaxi162Scf00108g00316 Petunia axillaris
PGR102G0920 Punica granatum
PGSC0003DMG400030693 Solanum tuberosum
Phvul.003G173600 Phaseolus vulgaris
Phvul.009G210216 Phaseolus vulgaris
Potri.006G060000 Populus trichocarpa
Potri.018G115601 Populus trichocarpa
Prupe.7G256100 Prunus persica
Psat0s503g0080 Pisum sativum
Psat0s5432g0040 Pisum sativum
Psat4g035400 Pisum sativum
PSO017G0897 Papaver somniferum
PSO170G6343 Papaver somniferum
QL02p091069 Quercus lobata
RcHm_v2.0_Chr2g0086811 Rosa chinensis
Rhsim01G0051900 Rhododendron simsii
Sabra06G0043300 Salix brachista
SalBow1G4427 Salvia bowleyana
SalBow1G8253 Salvia bowleyana
Sc08g0005870 Simmondsia chinensis
Sc14g0000100 Simmondsia chinensis
Sed0001942 Sechium edule
Sed0013238 Sechium edule
SGA_v2.0_scaffold229G43334 Striga asiatica
Solyc07g007270.3 Solanum lycopersicum
Sopen07g003330 Solanum pennellii
TAR362G0190 Trochodendron aralioides
TAR383G0338 Trochodendron aralioides
TAR625G1436 Trochodendron aralioides
TAR626G1415 Trochodendron aralioides
Thecc.09G139900 Theobroma cacao
TPR.G15789 Trifolium pratense
TWI32G1294 Tripterygium wilfordii
TWI34G1167 Tripterygium wilfordii
vmacro21889 Vaccinium macrocarpon
VMungo1215G2163 Vigna mungo
VMungo1309G0908 Vigna mungo

User provided reference genes

Program Settings